Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.7e-185 652.5 328 100.0
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 5.9e-138 494.6 330 78.2
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 1.3e-129 466.8 330 70.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 8.0e-127 457.6 328 73.2
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 6.6e-121 438.0 329 68.1
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 4.3e-120 435.3 329 67.2
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.6e-119 433.3 329 67.2
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 6.2e-119 431.4 329 68.1
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 6.2e-119 431.4 329 68.1
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 1.1e-115 420.6 329 66.3
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.9e-115 419.9 329 65.7
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.7e-113 413.3 330 64.5
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.9e-113 412.1 329 65.7
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 6.8e-110 401.4 329 62.3
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 8.9e-110 401.0 322 64.0
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.6e-109 399.4 329 62.3
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.4e-109 399.1 329 63.8
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.4e-109 399.1 329 63.8
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.4e-107 393.7 329 62.9
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 7.8e-106 387.9 330 60.6
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.7e-105 386.7 342 60.2
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.6e-103 380.2 327 60.6
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 2.1e-103 379.8 330 60.0
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.1e-103 379.8 329 59.9
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.4e-102 377.1 342 58.5
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 5.8e-101 371.7 330 60.0
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 5.8e-101 371.7 330 59.1
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.7e-100 370.2 330 58.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 6.4e-100 368.2 330 59.7
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.4e-99 366.3 329 57.8
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.2e-99 365.9 329 57.8
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 9.3e-99 364.4 330 56.7
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.2e-98 364.0 302 62.6
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 1.6e-98 363.6 329 58.1
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.1e-98 363.2 329 57.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.7e-98 362.8 331 58.3
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 3.5e-98 362.5 329 56.8
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 7.8e-98 361.3 330 57.3
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.0e-97 360.9 329 56.2
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.1e-97 358.6 329 57.4
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 8.7e-97 357.8 332 56.3
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.1e-96 357.5 329 55.6
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 3.3e-96 355.9 326 58.0
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 3.3e-96 355.9 327 58.1
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.3e-96 355.5 326 56.7
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 5.6e-96 355.1 329 55.9
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 5.6e-96 355.1 329 57.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 7.3e-96 354.8 329 55.9
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.3e-95 354.0 320 57.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 2.8e-95 352.8 329 56.5
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 2.8e-95 352.8 329 56.2
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 3.1e-94 349.4 330 54.8
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 6.9e-94 348.2 329 54.7
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 6.9e-94 348.2 329 55.6
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 9.0e-94 347.8 335 56.1
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 9.0e-94 347.8 330 56.7
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-93 347.4 337 56.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.4e-93 345.9 330 55.5
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.4e-93 345.9 337 56.1
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.3e-92 344.0 346 54.0
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 1.3e-92 344.0 322 55.9
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.3e-92 344.0 329 53.8
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.3e-92 344.0 328 54.6
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 4.9e-92 342.0 331 54.7
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 8.4e-92 341.3 332 54.2
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.1e-91 340.9 329 56.5
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.4e-91 340.5 327 53.2
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.4e-91 340.5 333 57.1
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 3.5e-90 335.9 333 54.7
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.5e-90 335.9 334 54.8
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 4.6e-90 335.5 330 53.0
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 7.9e-90 334.7 334 53.0
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 8.7e-89 331.3 329 52.6
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 1.5e-88 330.5 331 55.3
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.5e-88 329.7 337 54.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 4.3e-88 328.9 329 52.6
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 2.1e-87 326.6 328 53.0
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 1.1e-86 324.3 328 53.7
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 9.0e-86 321.2 330 50.3
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.2e-85 320.9 330 53.6
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.2e-85 320.9 330 53.6
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.5e-85 320.5 333 53.2
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 3.4e-85 319.3 306 56.5
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 4.5e-85 318.9 289 56.7
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 9.9e-85 317.8 329 53.5
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 9.9e-85 317.8 292 56.5
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.7e-82 309.7 293 56.0
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.8e-81 307.0 367 49.9
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 3.1e-78 296.2 324 50.6
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 9.0e-78 294.7 187 82.4
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 3.8e-76 289.3 329 48.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.1e-74 283.5 266 56.0
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 2.3e-73 280.0 336 47.6
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.8e-70 270.4 267 53.6
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 2.4e-70 270.0 332 43.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.0e-69 266.9 333 48.3
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 4.5e-69 265.8 330 46.4
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 9.3e-67 258.1 359 41.8
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 9.3e-67 258.1 260 53.5
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 9.3e-67 258.1 338 42.6
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 8.2e-63 245.0 331 42.3
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 7.9e-58 228.4 216 58.3
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.1e-56 224.6 335 40.3
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 5.3e-54 215.7 385 36.4
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 2.9e-52 209.9 383 35.5
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 9.4e-43 178.3 139 66.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 8.0e-42 175.3 156 59.0
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 3.5e-37 159.8 132 59.8
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-32 144.8 118 57.6
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.0e-32 144.1 97 69.1
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 7.5e-32 142.1 210 41.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 5.9e-29 132.5 146 52.1
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.3e-28 131.3 134 52.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 2.2e-28 130.6 326 30.1
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.6e-26 124.4 123 55.3
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 2.6e-24 117.1 87 69.0
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.7e-23 114.4 108 50.9
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 4.5e-21 106.3 147 44.2
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.1e-18 95.9 158 36.7
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 2.6e-16 90.5 321 24.0
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.7e-16 89.4 61 70.5
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.5e-11 74.7 109 43.1
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.6e-10 71.2 66 53.0
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 4.4e-08 63.2 50 58.0
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 3.2e-06 57.0 50 50.0


User provided reference genes

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