Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 1.1e-232 809.7 437 100.0
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 5.3e-102 375.6 443 55.8
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 3.8e-100 369.4 451 49.9
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 5.7e-96 355.5 314 60.8
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.7e-87 327.4 459 45.8
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 2.0e-80 303.9 440 45.5
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 6.0e-77 292.4 457 42.2
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 5.0e-76 289.3 469 42.2
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 1.1e-75 288.1 468 44.7
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 3.1e-73 280.0 460 42.0
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.6e-72 276.9 453 41.7
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 4.9e-71 272.7 451 41.5
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 1.1e-70 271.6 451 39.9
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.4e-70 271.2 444 45.9
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.4e-70 271.2 474 42.6
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 2.1e-69 267.3 469 43.3
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 6.0e-69 265.8 459 39.0
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 7.8e-69 265.4 462 42.2
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.0e-68 265.0 457 42.5
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 1.3e-68 264.6 459 43.4
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.7e-68 264.2 468 42.5
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 8.6e-68 261.9 455 40.0
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 2.5e-67 260.4 460 39.3
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 4.3e-67 259.6 468 39.7
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 5.6e-67 259.2 463 42.3
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 2.8e-66 256.9 443 40.2
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 8.1e-66 255.4 456 43.4
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 3.1e-65 253.4 454 39.4
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 5.2e-65 252.7 461 39.0
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 5.2e-65 252.7 462 39.6
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 6.8e-65 252.3 459 38.6
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 2.0e-64 250.8 452 38.9
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 5.8e-64 249.2 466 38.4
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.2e-63 247.3 464 42.7
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 4.9e-63 246.1 454 42.7
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 2.4e-62 243.8 460 41.5
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 3.2e-62 243.4 480 37.7
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 1.2e-61 241.5 457 42.2
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 1.6e-61 241.1 464 42.0
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.3e-60 237.3 456 38.4
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 3.0e-60 236.9 439 39.4
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 5.1e-60 236.1 458 39.7
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.6e-60 235.7 455 37.8
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 2.8e-58 230.3 443 39.1
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 1.5e-56 224.6 446 36.5
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 9.9e-56 221.9 486 35.8
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.8e-55 219.9 447 38.0
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.4e-55 218.8 453 39.5
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 1.1e-54 218.4 496 36.3
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 1.1e-54 218.4 448 35.3
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 2.4e-54 217.2 447 38.3
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 3.2e-54 216.9 443 35.2
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 5.4e-54 216.1 387 41.9
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.1e-53 214.2 442 36.7
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 2.7e-53 213.8 442 39.1
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.5e-53 213.4 453 40.0
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 6.0e-53 212.6 455 40.0
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 7.8e-53 212.2 442 38.0
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 1.3e-52 211.5 437 35.9
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.7e-52 211.1 324 41.4
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 2.3e-52 210.7 484 38.2
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 5.1e-52 209.5 437 38.2
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 6.6e-52 209.1 442 37.8
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 8.7e-52 208.8 459 36.8
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 8.7e-52 208.8 322 41.0
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 8.7e-52 208.8 446 36.8
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 1.5e-51 208.0 465 36.1
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 1.5e-51 208.0 437 38.2
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 1.9e-51 207.6 464 37.7
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 7.3e-51 205.7 443 35.9
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 1.3e-50 204.9 458 34.1
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.1e-50 204.1 454 35.7
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 2.8e-50 203.8 465 35.7
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.6e-50 203.4 452 38.1
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 4.8e-50 203.0 442 34.8
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 6.2e-50 202.6 450 38.2
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 1.4e-49 201.4 446 37.0
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 4.0e-49 199.9 445 36.2
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 9.0e-49 198.7 453 37.1
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 3.4e-48 196.8 464 33.8
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 5.8e-48 196.1 445 37.8
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 1.3e-47 194.9 442 35.5
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 2.2e-47 194.1 463 33.9
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 2.9e-47 193.7 457 36.1
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 6.4e-47 192.6 452 36.5
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 8.4e-47 192.2 464 34.1
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.1e-46 191.8 465 34.6
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 1.9e-46 191.0 452 35.8
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 3.2e-46 190.3 455 38.2
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 9.3e-46 188.7 467 37.0
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 1.6e-45 188.0 444 32.9
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 2.1e-45 187.6 454 36.8
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 6.0e-45 186.0 468 36.5
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.9e-45 185.7 454 34.8
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 1.0e-44 185.3 453 33.8
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 3.0e-44 183.7 432 34.0
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 6.6e-44 182.6 466 32.0
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 6.6e-44 182.6 440 32.0
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.1e-43 181.8 447 32.4
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.5e-43 181.4 444 33.3
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.9e-43 181.0 515 30.9
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 2.5e-43 180.6 456 35.3
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 4.3e-43 179.9 443 34.5
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 5.6e-43 179.5 443 34.3
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 5.6e-43 179.5 451 35.9
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 1.3e-42 178.3 458 32.8
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 1.6e-42 177.9 454 35.5
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 1.6e-42 177.9 455 36.3
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 2.8e-42 177.2 460 33.5
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.6e-42 176.8 449 32.3
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 8.1e-42 175.6 450 31.8
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 4.0e-41 173.3 456 36.2
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 4.0e-41 173.3 450 31.6
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 5.3e-41 172.9 457 32.4
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 1.2e-40 171.8 562 30.8
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 1.5e-40 171.4 462 34.8
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 2.6e-40 170.6 452 35.0
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 3.4e-40 170.2 464 33.0
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 9.9e-40 168.7 441 33.8
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 1.4e-38 164.9 455 32.5
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 1.4e-38 164.9 451 31.3
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.9e-38 164.5 442 31.9
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 5.5e-38 162.9 373 38.6
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 3.5e-37 160.2 449 32.7
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 1.8e-36 157.9 454 33.9
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 2.3e-36 157.5 458 32.8
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 6.7e-36 156.0 469 30.5
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 6.7e-36 156.0 461 32.3
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 6.7e-36 156.0 445 32.8
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 1.1e-35 155.2 422 31.5
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 4.3e-35 153.3 379 32.7
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 7.4e-35 152.5 447 32.2
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 9.6e-35 152.1 449 33.4
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 1.3e-34 151.8 441 34.2
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 2.1e-34 151.0 441 33.3
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 2.1e-34 151.0 445 35.7
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 3.7e-34 150.2 452 35.0
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 3.7e-34 150.2 446 31.8
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.7e-34 150.2 450 31.6
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 2.4e-33 147.5 447 31.3
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 3.1e-33 147.1 316 37.7
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 4.0e-33 146.7 468 32.3
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 1.5e-32 144.8 437 31.1
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 4.9e-31 139.8 280 36.8
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 4.9e-31 139.8 328 36.6
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 2.5e-30 137.5 459 30.7
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 7.1e-30 136.0 462 30.1
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 7.1e-30 136.0 466 31.5
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 4.6e-29 133.3 229 41.5
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.0e-28 132.1 450 30.7
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 4.3e-27 126.7 379 32.2
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 7.4e-27 125.9 460 29.3
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 9.6e-27 125.6 456 29.2
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 1.3e-26 125.2 379 33.8
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 2.1e-26 124.4 456 28.3
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 1.2e-24 118.6 386 29.3
SalBow6G4465 Salvia bowleyana HOM05D003379 ORTHO05D003862 3.4e-24 117.1 141 59.6
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 1.7e-23 114.8 449 29.0
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 2.2e-23 114.4 445 29.0
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 8.4e-23 112.5 451 28.2
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 1.9e-22 111.3 414 30.7
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 7.2e-22 109.4 270 35.2
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 5.1e-20 103.2 432 30.1
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 1.6e-18 98.2 348 27.3
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 6.3e-18 96.3 276 29.7
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 4.1e-17 93.6 340 32.1
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 9.0e-17 92.4 433 26.6
Mapoly0001s0546 Marchantia polymorpha HOM05D003379 ORTHO05D003862 1.0e-15 89.0 537 27.6
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 2.9e-15 87.4 374 27.3
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 3.8e-15 87.0 376 28.2
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 2.7e-13 80.9 164 36.0
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 2.5e-11 74.3 206 30.6
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 3.3e-11 73.9 100 42.0
C03p62180 Brassica napus HOM05D003379 ORTHO05D003862 3.3e-11 73.9 100 43.0
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 5.7e-11 73.2 100 42.0
BraA05t20213Z Brassica rapa HOM05D003379 ORTHO05D003862 8.2e-10 69.3 100 45.0
A05p12750 Brassica napus HOM05D003379 ORTHO05D003862 1.4e-09 68.6 151 37.7
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.8e-09 68.2 186 33.3
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 2.4e-09 67.8 200 30.0
Pp3c5_23700 Physcomitrium patens HOM05D003379 ORTHO05D003862 4.1e-09 67.0 532 26.9
AagrBONN_evm.TU.Sc2ySwM_369.605 Anthoceros agrestis HOM05D003379 ORTHO05D003862 6.9e-09 66.2 322 26.4
Hma1.2p1_0421F.1_g149960 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 9.1e-09 65.9 95 40.0
BcaC09g48308 Brassica carinata HOM05D003379 ORTHO05D003862 1.1e-06 58.9 76 47.4
Ah.14g088790 Amaranthus hybridus HOM05D003379 ORTHO05D003862 1.9e-06 58.2 225 30.7
RcHm_v2.0_Chr2g0176501 Rosa chinensis HOM05D003379 ORTHO05D003862 7.2e-06 56.2 139 46.8
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 9.4e-06 55.8 211 29.9


User provided reference genes

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