Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 0.0e+00 2206.0 1179 100.0
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.3e-219 767.7 1206 42.9
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 4.8e-214 749.2 1210 43.0
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 3.5e-180 636.7 1196 37.6
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 2.5e-146 524.2 683 46.9
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 6.9e-120 436.4 689 42.1
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.4e-112 412.1 1238 31.9
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 4.0e-112 410.6 1225 31.1
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.7e-110 405.2 1230 31.7
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.4e-109 402.1 577 41.1
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 3.5e-108 397.5 554 43.7
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 7.9e-108 396.4 1209 31.1
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.3e-107 395.6 1232 32.5
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.9e-106 391.7 636 38.8
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 2.5e-106 391.3 1198 31.2
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 7.4e-106 389.8 764 35.7
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.5e-103 382.1 540 43.7
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.9e-103 380.2 645 38.0
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.7e-102 378.6 575 41.2
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 2.2e-102 378.3 615 39.0
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.5e-101 374.8 607 39.5
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.2e-100 372.5 545 43.3
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.2e-100 372.5 626 38.5
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 2.3e-99 368.2 1235 31.6
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 3.0e-99 367.9 609 39.6
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.0e-98 365.2 1206 29.9
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 2.0e-98 365.2 1240 29.0
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.8e-97 361.3 645 37.1
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 3.7e-97 360.9 579 40.6
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.4e-96 359.0 579 39.9
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 4.5e-95 354.0 672 37.2
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 7.7e-95 353.2 1220 30.3
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.2e-94 351.7 583 37.7
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 3.2e-93 347.8 1237 29.0
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 3.6e-92 344.4 540 40.6
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 3.6e-92 344.4 499 41.7
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.7e-91 340.1 576 37.7
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 8.8e-91 339.7 578 37.2
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.8e-91 339.7 581 36.7
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 8.8e-91 339.7 1256 28.7
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 4.4e-90 337.4 616 38.5
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 4.4e-90 337.4 593 38.8
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.3e-89 335.9 584 37.3
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.8e-89 334.0 582 36.8
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.8e-89 334.0 582 36.9
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 4.8e-89 334.0 592 38.5
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 6.3e-89 333.6 642 37.5
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.1e-88 332.8 605 36.5
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 5.3e-88 330.5 589 35.5
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.5e-86 323.2 646 34.2
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.5e-85 322.4 605 36.7
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.8e-83 315.5 1186 27.8
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.6e-82 311.6 632 33.9
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.3e-82 311.2 546 36.3
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 6.3e-81 307.0 1197 27.9
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.8e-80 305.4 616 34.3
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 3.1e-80 304.7 1195 27.6
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 4.1e-80 304.3 595 34.3
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 9.1e-80 303.1 655 32.7
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 5.9e-79 300.4 733 32.7
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 3.2e-77 294.7 761 31.7
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 4.2e-77 294.3 670 32.2
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 1.6e-76 292.4 545 36.0
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 3.6e-76 291.2 593 33.2
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 4.7e-76 290.8 568 35.6
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 4.7e-76 290.8 570 33.5
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.8e-75 288.9 585 34.2
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.3e-75 288.5 654 32.4
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 4.0e-75 287.7 610 33.9
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 5.2e-75 287.3 576 35.2
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.7e-73 282.3 573 34.2
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.4e-72 279.3 404 39.9
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 4.1e-72 277.7 385 40.3
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 3.5e-71 274.6 520 35.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.5e-69 269.2 545 34.3
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 5.5e-69 267.3 483 37.1
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 7.2e-69 266.9 1189 26.8
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 3.0e-67 261.5 524 33.8
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 6.8e-67 260.4 1231 26.6
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.2e-65 255.4 495 34.5
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 1.4e-64 252.7 607 31.6
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.7e-63 248.4 391 36.8
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.3e-62 246.1 391 36.3
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 5.0e-62 244.2 630 30.5
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 4.7e-60 237.7 516 32.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 2.3e-59 235.3 530 32.8
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 1.5e-58 232.6 604 30.8
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 2.0e-58 232.3 1221 25.9
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 2.6e-58 231.9 712 28.9
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 7.5e-58 230.3 525 32.8
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.3e-57 229.6 710 29.4
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.1e-56 226.5 535 30.1
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 1.1e-56 226.5 529 30.4
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 7.0e-56 223.8 540 31.7
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.7e-54 219.2 533 30.6
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 6.6e-54 217.2 329 37.7
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 8.6e-54 216.9 720 28.8
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.0e-47 194.1 397 33.0
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 1.2e-44 186.4 182 50.0
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.9e-40 172.6 401 31.7
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 1.7e-38 166.0 181 48.1
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 1.1e-35 156.8 553 25.3
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 4.4e-34 151.4 996 25.1
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 6.4e-33 147.5 323 32.2
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 4.1e-32 144.8 242 32.6
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.3e-30 139.0 227 37.0
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.9e-29 136.0 228 37.3
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 6.2e-28 131.0 294 31.3
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 8.1e-28 130.6 294 31.0
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 1.2e-26 126.7 262 30.9
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 4.4e-26 124.8 228 35.1
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 7.8e-23 114.0 262 31.7
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 4.0e-19 101.7 273 28.6
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 3.8e-17 95.1 181 32.6
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.7e-15 89.0 136 40.4
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 2.1e-12 79.3 73 49.3
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.4e-08 64.7 95 33.7


User provided reference genes

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