Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 4.5e-127 458.0 238 100.0
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 5.2e-51 205.3 230 57.4
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 7.0e-48 194.9 235 53.6
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 6.6e-46 188.3 254 52.4
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.2e-44 184.1 255 50.6
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 4.7e-44 182.2 237 51.1
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 8.1e-44 181.4 220 55.9
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 8.1e-44 181.4 227 52.9
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 1.1e-43 181.0 220 55.5
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 1.1e-43 181.0 220 55.5
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.1e-43 179.5 235 51.5
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 4.0e-43 179.1 232 51.3
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 8.9e-43 177.9 232 51.7
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 1.2e-42 177.6 247 50.6
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 3.7e-41 172.6 224 51.3
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 3.7e-41 172.6 233 53.2
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.4e-40 169.9 234 50.9
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 9.2e-40 167.9 249 48.2
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.2e-39 167.5 230 51.3
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 2.1e-39 166.8 231 51.5
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 6.0e-39 165.2 220 52.3
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 6.0e-39 165.2 218 51.4
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 7.8e-39 164.9 244 49.6
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.7e-38 163.7 230 52.6
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 3.9e-38 162.5 233 48.1
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.1e-37 161.0 247 47.8
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.1e-37 161.0 247 47.8
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 1.1e-37 161.0 223 50.2
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 1.5e-37 160.6 233 50.6
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 1.5e-37 160.6 243 51.0
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.5e-37 160.6 227 53.7
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.3e-37 159.5 263 46.8
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 5.6e-37 158.7 233 47.6
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 6.2e-36 155.2 236 47.5
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.4e-35 154.1 228 47.4
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 3.1e-35 152.9 226 48.2
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 4.0e-35 152.5 219 51.6
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.2e-34 151.0 266 44.4
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 2.0e-34 150.2 226 47.8
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 2.6e-34 149.8 230 47.4
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 2.6e-34 149.8 227 48.9
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 4.4e-34 149.1 262 43.9
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 5.8e-34 148.7 232 49.6
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 4.9e-33 145.6 252 43.3
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 8.4e-33 144.8 223 48.0
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 1.4e-32 144.1 249 46.2
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 1.9e-32 143.7 250 42.8
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 4.2e-32 142.5 205 52.7
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 1.6e-31 140.6 269 41.6
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 1.6e-31 140.6 260 42.7
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 2.7e-31 139.8 249 46.6
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 3.5e-31 139.4 254 41.3
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 2.3e-30 136.7 200 50.0
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 3.0e-30 136.3 257 42.0
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 8.7e-30 134.8 228 44.3
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.9e-29 133.7 223 46.2
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 2.5e-29 133.3 230 43.9
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 5.6e-29 132.1 232 44.8
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 7.3e-29 131.7 205 46.3
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 7.3e-29 131.7 243 45.3
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 9.6e-29 131.3 229 44.1
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 8.1e-28 128.3 256 42.6
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 1.1e-27 127.9 194 48.5
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 1.8e-27 127.1 238 42.4
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 2.4e-27 126.7 256 41.0
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 5.3e-27 125.6 223 42.2
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 9.9e-26 121.3 228 42.1
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 1.7e-25 120.6 280 38.6
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 4.9e-25 119.0 139 56.8
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 6.4e-25 118.6 269 39.0
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 9.6e-21 104.8 175 44.6
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.3e-20 104.4 230 38.7
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 2.8e-20 103.2 239 38.1
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.8e-20 103.2 232 39.7
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.1e-19 101.3 188 45.7
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.8e-19 100.5 232 37.5
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 2.0e-18 97.1 232 35.8
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 4.5e-18 95.9 238 37.0
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 4.5e-18 95.9 214 39.3
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 6.4e-17 92.0 206 37.9
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 1.1e-16 91.3 278 32.4
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 7.1e-16 88.6 277 31.8
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 1.6e-15 87.4 271 34.3
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 2.7e-15 86.7 272 32.7
C01p35720 Brassica napus HOM05D007616 ORTHO05D008751 3.5e-15 86.3 143 42.0
BolC1t03530H Brassica oleracea HOM05D007616 ORTHO05D008751 3.5e-15 86.3 143 42.0
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.1e-14 82.4 228 34.2
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 8.7e-14 81.6 228 37.7
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 8.7e-14 81.6 181 41.4
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.5e-13 80.9 221 31.7
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 7.4e-13 78.6 203 36.0
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 1.3e-12 77.8 265 31.7
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 2.8e-12 76.6 144 47.2
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 3.7e-12 76.3 125 47.2
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 8.1e-12 75.1 85 57.6
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 1.4e-11 74.3 123 48.8
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 2.0e-10 70.5 104 44.2
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 2.2e-09 67.0 209 36.4
Sp2g05500 Schrenkiella parvula HOM05D012662 ORTHO05D008751 2.2e-09 67.0 115 41.7
BraA09t37484Z Brassica rapa HOM05D012662 ORTHO05D008751 4.9e-09 65.9 114 41.2
C04p26930 Brassica napus HOM05D007616 ORTHO05D008751 2.5e-08 63.5 130 40.0
BolC4t24105H Brassica oleracea HOM05D007616 ORTHO05D008751 2.5e-08 63.5 130 40.0
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 4.2e-08 62.8 212 30.7
Rhsim05G0130500 Rhododendron simsii HOM05D007616 ORTHO05D008751 4.2e-08 62.8 100 50.0
BcaC04g22113 Brassica carinata HOM05D012662 ORTHO05D008751 7.1e-08 62.0 100 42.0
C09p23200 Brassica napus HOM05D012662 ORTHO05D008751 7.1e-08 62.0 100 42.0
BolC9t55239H Brassica oleracea HOM05D012662 ORTHO05D008751 7.1e-08 62.0 100 42.0
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 9.3e-08 61.6 221 28.5
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 2.7e-07 60.1 214 29.4
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 6.0e-07 58.9 216 29.2
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 7.9e-07 58.5 216 29.2
Cfa013943 Carpinus fangiana HOM05D002661 ORTHO05D002786 1.0e-06 58.2 220 29.5
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 1.0e-06 58.2 220 28.6
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.3e-06 57.8 208 29.3
A02p20180 Brassica napus HOM05D002661 ORTHO05D002786 1.8e-06 57.4 226 29.2
BraA02t07053Z Brassica rapa HOM05D002661 ORTHO05D002786 2.3e-06 57.0 226 27.4
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 3.0e-06 56.6 211 28.0
CARHR053990 Cardamine hirsuta HOM05D012662 ORTHO05D008751 3.9e-06 56.2 275 28.7
PGR031G0175 Punica granatum HOM05D002661 ORTHO05D002786 3.9e-06 56.2 251 27.1
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 5.1e-06 55.8 227 28.2
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 5.1e-06 55.8 210 28.6
Ciclev10010690m.g Citrus clementina HOM05D002661 ORTHO05D002786 6.7e-06 55.5 213 29.6
MD15G1013000 Malus domestica HOM05D002661 ORTHO05D002786 8.7e-06 55.1 219 26.9
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 8.7e-06 55.1 220 28.2
TWI56G0437 Tripterygium wilfordii HOM05D002661 ORTHO05D002786 8.7e-06 55.1 242 26.4


User provided reference genes

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