Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 6.9e-232 807.0 418 100.0
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 7.6e-130 468.0 323 74.3
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 1.5e-114 417.2 417 55.2
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.3e-112 407.9 409 55.0
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.3e-112 407.9 409 55.5
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 7.9e-111 404.8 302 69.5
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 5.1e-110 402.1 303 66.3
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 5.6e-109 398.7 434 52.8
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 7.4e-109 398.3 315 63.8
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 7.4e-109 398.3 343 61.8
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.6e-109 397.9 324 64.2
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.4e-107 393.3 301 67.4
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 9.0e-107 391.3 311 62.7
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.6e-106 389.8 311 61.7
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 5.8e-106 388.7 311 63.7
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.0e-105 387.9 311 62.1
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 3.8e-105 386.0 333 60.7
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 8.4e-105 384.8 315 60.0
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 8.4e-105 384.8 309 65.4
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 8.4e-105 384.8 328 60.4
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.1e-104 384.4 311 62.7
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 2.5e-104 383.3 308 64.0
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 1.2e-103 380.9 412 52.2
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 1.6e-103 380.6 308 62.7
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 6.0e-103 378.6 387 53.7
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 7.9e-103 378.3 319 58.9
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 1.0e-102 377.9 323 60.1
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.0e-102 377.9 410 51.2
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 2.3e-102 376.7 411 51.6
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 8.7e-102 374.8 304 62.2
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 8.7e-102 374.8 308 61.0
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.1e-101 374.4 305 61.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.5e-101 374.0 327 61.5
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.5e-101 374.0 408 51.7
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 2.5e-101 373.2 306 63.7
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 4.3e-101 372.5 315 60.3
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 4.3e-101 372.5 406 49.3
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 5.7e-101 372.1 310 61.6
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 7.4e-101 371.7 408 51.2
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 9.7e-101 371.3 335 58.8
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.3e-100 370.9 347 55.3
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 1.3e-100 370.9 310 61.0
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 3.7e-100 369.4 309 60.2
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.7e-100 369.4 326 60.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 4.8e-100 369.0 346 57.5
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 4.8e-100 369.0 308 61.0
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 6.3e-100 368.6 303 60.1
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 1.1e-99 367.9 409 50.1
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.4e-99 367.5 318 59.7
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.8e-99 367.1 303 59.7
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 9.0e-99 364.8 310 58.1
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.2e-98 364.4 307 59.3
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 1.5e-98 364.0 363 53.7
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 2.0e-98 363.6 414 49.8
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 4.5e-98 362.5 348 55.5
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.5e-98 362.5 389 50.9
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 5.9e-98 362.1 320 56.2
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 5.9e-98 362.1 320 58.8
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 1.3e-97 360.9 318 57.5
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 2.9e-97 359.8 439 47.4
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 3.8e-97 359.4 314 58.3
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 8.5e-97 358.2 376 54.0
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.1e-96 357.8 307 58.6
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.9e-96 357.1 316 57.3
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 2.5e-96 356.7 312 59.3
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 7.2e-96 355.1 319 56.7
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 2.1e-95 353.6 309 58.3
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 2.7e-95 353.2 308 57.5
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 3.6e-95 352.8 309 58.3
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 4.6e-95 352.4 308 57.8
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.3e-94 350.9 312 57.7
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 1.3e-94 350.9 308 57.8
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 2.3e-94 350.1 309 57.6
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 5.1e-94 349.0 314 56.7
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 5.1e-94 349.0 312 55.8
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 6.7e-94 348.6 312 59.0
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.5e-93 347.4 313 58.8
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 2.5e-93 346.7 277 64.6
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 7.4e-93 345.1 314 56.4
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.7e-92 344.0 314 56.1
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 4.1e-91 339.3 280 61.8
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 9.1e-91 338.2 338 54.7
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 3.4e-90 336.3 337 54.3
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.9e-89 333.2 308 58.8
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 8.5e-89 331.6 280 61.1
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 2.5e-88 330.1 350 53.4
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.6e-87 325.9 376 51.1
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 7.9e-87 325.1 321 54.5
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.0e-86 324.7 291 58.8
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.8e-86 323.9 463 46.0
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 3.0e-86 323.2 308 56.2
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 3.0e-86 323.2 308 55.8
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 2.0e-85 320.5 284 58.1
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 5.7e-85 318.9 284 57.7
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 1.5e-82 310.8 338 52.4
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 6.5e-81 305.4 280 57.1
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 8.5e-81 305.1 341 49.9
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.9e-80 303.9 310 54.5
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 9.1e-75 285.0 272 54.4
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 2.9e-65 253.4 228 58.8
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 8.5e-65 251.9 260 51.5
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.1e-64 251.5 299 48.2
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 9.4e-64 248.4 326 46.3
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.7e-63 246.9 223 57.4
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.0e-62 245.0 306 45.4
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.0e-62 245.0 193 64.2
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 1.8e-62 244.2 281 49.5
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 2.3e-57 227.3 230 55.7
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 5.0e-57 226.1 212 55.7
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.4e-54 218.0 302 43.4
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 3.7e-52 209.9 173 61.3
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.6e-50 204.5 289 42.2
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.8e-46 191.0 274 43.8
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 3.2e-43 180.3 346 37.6
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 3.1e-38 163.7 127 62.2
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 7.5e-29 132.5 103 61.2
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 7.5e-29 132.5 103 61.2
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 4.1e-27 126.7 94 67.0
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.2e-23 115.2 96 61.5
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 1.2e-23 115.2 96 61.5
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-22 112.1 96 59.4
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 3.4e-21 107.1 90 54.4
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 8.4e-20 102.4 105 49.5
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.5e-16 91.7 94 55.3
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.0e-13 81.3 51 72.5
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.8e-12 77.0 64 57.8


User provided reference genes

Program Settings