Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 3.8e-134 481.5 240 100.0
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 8.6e-78 294.3 223 66.4
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 4.3e-69 265.4 223 61.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 2.0e-66 256.5 259 54.1
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 5.4e-64 248.4 221 60.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.7e-57 226.9 226 52.7
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.7e-57 226.9 224 51.8
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 6.4e-57 224.9 230 52.6
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 8.4e-57 224.6 229 51.5
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 4.2e-56 222.2 223 51.6
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 9.3e-56 221.1 224 51.8
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.6e-55 220.3 226 50.0
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.0e-54 217.6 222 48.2
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.3e-54 217.2 236 47.9
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.5e-53 213.0 224 48.7
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.5e-53 213.0 229 49.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 5.6e-53 211.8 227 49.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.3e-52 210.7 229 49.8
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 2.8e-52 209.5 225 49.3
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 8.1e-52 208.0 220 50.5
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.1e-51 207.6 235 47.7
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 4.0e-51 205.7 233 49.4
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 6.9e-51 204.9 222 49.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 7.6e-50 201.4 223 47.5
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 1.7e-49 200.3 221 50.2
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.7e-49 200.3 224 46.9
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 4.9e-49 198.7 212 47.2
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 4.9e-49 198.7 223 47.1
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 1.4e-48 197.2 225 51.1
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.1e-47 193.4 223 49.3
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.1e-47 193.4 223 49.3
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.3e-46 190.7 253 42.7
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 3.0e-46 189.5 216 49.5
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 3.3e-45 186.0 222 49.1
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.3e-44 184.1 243 43.6
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 8.1e-44 181.4 213 46.0
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.8e-43 180.3 224 46.4
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 4.0e-43 179.1 266 41.0
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 5.3e-43 178.7 262 41.6
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 1.2e-42 177.6 216 47.2
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 9.9e-42 174.5 229 45.0
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 1.3e-41 174.1 256 42.2
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 6.4e-41 171.8 248 41.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.5e-37 160.6 205 44.4
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 3.7e-36 156.0 220 40.5
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 2.6e-34 149.8 236 41.9
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 2.9e-33 146.4 219 41.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 6.5e-33 145.2 126 57.9
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 3.9e-30 136.0 257 35.4
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 1.1e-24 117.9 164 45.1
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 4.2e-24 115.9 167 42.5
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-24 115.9 197 36.5
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 7.2e-24 115.2 195 39.5
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 9.3e-24 114.8 167 41.9
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-22 108.6 164 43.3
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 6.7e-22 108.6 164 43.3
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 4.8e-20 102.4 74 64.9
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 6.3e-20 102.1 164 42.7
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 6.9e-19 98.6 75 58.7
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 9.1e-19 98.2 155 38.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 1.7e-17 94.0 65 69.2
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 2.5e-16 90.1 149 36.2
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 7.4e-13 78.6 46 76.1


User provided reference genes

Program Settings