Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.2e-275 952.6 515 100.0
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 9.5e-191 670.6 516 73.4
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 6.4e-187 657.9 517 72.3
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 2.5e-183 646.0 518 69.3
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 7.3e-183 644.4 517 71.6
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.0e-173 612.1 523 64.1
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 4.6e-169 598.6 522 64.0
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 2.3e-168 596.3 505 64.2
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 2.4e-162 576.2 523 62.0
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.7e-161 572.8 488 64.3
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.0e-160 570.9 525 61.5
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 5.1e-160 568.5 493 62.9
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 6.6e-160 568.2 525 61.3
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.3e-159 565.5 526 61.0
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 5.6e-159 565.1 481 65.1
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 1.2e-158 563.9 479 65.3
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 4.7e-158 562.0 486 64.2
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 8.1e-158 561.2 528 61.2
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.8e-157 560.1 495 63.0
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 4.4e-156 555.4 471 64.1
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 4.4e-156 555.4 480 62.3
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 3.8e-155 552.4 522 60.3
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 3.8e-155 552.4 509 60.5
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.4e-154 550.4 488 61.5
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.9e-154 550.1 493 61.1
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 9.3e-154 547.7 525 60.8
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.7e-153 546.2 509 59.7
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 4.6e-153 545.4 509 59.7
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 1.0e-152 544.3 522 59.6
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 3.9e-152 542.3 519 61.3
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 1.5e-151 540.4 518 57.5
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.5e-151 540.4 506 60.1
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 9.6e-151 537.7 505 58.6
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.8e-150 536.2 512 59.2
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 6.2e-150 535.0 525 59.6
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 8.1e-150 534.6 469 64.6
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 8.1e-150 534.6 490 60.8
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.1e-150 534.6 501 60.1
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 4.0e-149 532.3 518 57.5
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 6.9e-149 531.6 471 61.8
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.2e-148 530.8 510 60.2
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.5e-148 530.4 520 60.6
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.0e-148 530.0 510 60.4
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 2.0e-148 530.0 465 63.2
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 3.4e-148 529.3 483 62.1
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 7.6e-148 528.1 469 62.9
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 5.4e-146 521.9 525 58.1
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 9.3e-146 521.2 528 59.8
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 1.2e-145 520.8 516 58.7
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.2e-145 520.8 527 58.4
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 1.0e-144 517.7 390 68.2
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.0e-144 517.7 520 60.2
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 1.8e-144 516.9 516 57.8
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 6.7e-144 515.0 490 60.0
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.9e-143 513.5 520 58.1
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 5.6e-143 511.9 408 66.7
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 7.4e-143 511.5 521 58.3
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 9.6e-143 511.1 413 65.6
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 5.3e-141 505.4 572 53.1
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 6.9e-141 505.0 431 62.6
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.2e-140 504.2 437 62.2
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 1.3e-139 500.7 416 65.1
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 1.7e-139 500.4 514 56.0
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 1.7e-139 500.4 514 56.0
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.9e-139 499.6 508 55.7
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 8.4e-139 498.0 520 56.9
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 1.4e-138 497.3 522 55.7
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 3.2e-138 496.1 512 56.6
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 1.3e-136 490.7 509 56.6
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.3e-136 490.7 474 57.8
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 3.0e-136 489.6 522 56.9
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 5.1e-136 488.8 518 54.4
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 6.7e-136 488.4 534 53.9
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 6.7e-136 488.4 520 54.6
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 8.2e-134 481.5 523 54.7
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 2.4e-133 479.9 511 54.6
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.4e-133 479.9 522 55.2
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 4.0e-133 479.2 505 56.4
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 9.0e-133 478.0 544 54.4
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 2.0e-132 476.9 514 54.1
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 1.0e-131 474.6 391 64.7
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.3e-131 474.2 520 54.2
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 8.4e-131 471.5 535 52.9
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 2.5e-130 469.9 531 53.1
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.5e-130 469.9 517 53.8
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 3.2e-130 469.5 508 54.7
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 4.2e-130 469.2 535 53.3
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 9.3e-130 468.0 413 62.0
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 2.1e-129 466.8 472 54.9
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 3.5e-129 466.1 530 53.2
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 3.5e-129 466.1 530 53.2
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.5e-129 466.1 527 54.1
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 4.6e-129 465.7 409 60.1
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 7.9e-129 464.9 513 54.8
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 7.9e-129 464.9 405 62.0
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.0e-128 464.5 521 53.2
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 3.0e-128 463.0 469 53.7
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 3.9e-128 462.6 480 54.2
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 1.1e-127 461.1 407 57.7
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-126 457.6 413 61.0
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 1.3e-126 457.6 415 59.8
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 2.2e-126 456.8 556 50.4
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 8.8e-120 434.9 393 59.3
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 8.8e-120 434.9 391 60.4
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 2.2e-115 420.2 362 64.1
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 8.5e-115 418.3 424 55.9
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.1e-114 417.9 363 61.4
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.2e-114 416.4 399 59.1
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 8.2e-110 401.7 380 54.7
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 2.6e-103 380.2 383 58.0
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 2.2e-102 377.1 479 49.9
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.0e-99 368.2 370 57.8
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 9.4e-98 361.7 314 57.6
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 7.5e-95 352.1 528 42.8
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.6e-92 344.4 335 59.1
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.1e-85 321.6 277 62.8
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.1e-85 321.6 277 62.8
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 7.7e-84 315.5 528 38.1
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 5.5e-82 309.3 351 54.7
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 1.2e-81 308.1 490 39.0
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 6.1e-81 305.8 306 58.2
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.7e-78 297.7 312 51.3
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 4.0e-72 276.6 270 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 5.2e-72 276.2 504 38.9
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.9e-70 269.6 233 58.8
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 6.2e-65 252.7 604 35.8
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.0e-60 236.1 320 50.0
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 6.2e-57 226.1 476 36.3
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.7e-51 208.0 177 62.1
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 7.6e-47 192.6 159 64.2
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 1.2e-44 185.3 157 63.1
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.5e-42 178.3 239 50.6
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 4.0e-40 170.2 144 63.2
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 5.1e-35 153.3 190 52.6
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 9.3e-29 132.5 109 63.3
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 1.3e-25 122.1 107 64.5
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 1.3e-25 122.1 107 64.5
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 6.9e-24 116.3 164 46.3
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 4.5e-23 113.6 143 53.1
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.5e-21 107.8 126 47.6
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 4.6e-20 103.6 95 58.9
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.5e-18 98.6 102 55.9
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 9.0e-16 89.4 69 63.8
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 1.1e-13 82.4 141 44.0
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 1.9e-13 81.6 71 57.7
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 4.2e-13 80.5 75 58.7
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 7.2e-13 79.7 70 64.3
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.2e-12 79.0 151 35.8
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 1.5e-10 72.0 107 42.1
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 1.5e-10 72.0 61 63.9
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 5.3e-08 63.5 145 32.4
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 6.9e-08 63.2 150 34.0
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.6e-07 61.2 144 32.6
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 2.9e-06 57.8 247 27.9


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