Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 1.8e-262 908.7 443 100.0
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 5.6e-232 807.4 441 86.8
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 9.9e-221 770.0 441 81.9
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 8.4e-220 766.9 441 82.3
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 8.1e-215 750.4 474 76.6
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 2.9e-212 741.9 435 80.0
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 1.9e-211 739.2 441 78.9
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 7.1e-211 737.3 441 78.0
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 9.3e-211 736.9 441 78.2
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 3.5e-210 734.9 451 78.7
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 7.8e-210 733.8 441 78.2
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 8.7e-209 730.3 450 77.8
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 5.6e-208 727.6 441 77.1
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 1.3e-207 726.5 436 77.1
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 4.8e-207 724.5 442 76.7
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 6.2e-207 724.2 441 77.3
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 1.1e-206 723.4 441 76.6
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 1.8e-206 722.6 441 76.9
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 5.3e-206 721.1 442 76.2
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 6.9e-206 720.7 441 75.5
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 2.0e-205 719.2 441 76.6
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 5.8e-205 717.6 441 75.3
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 1.7e-204 716.1 441 76.9
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 2.2e-204 715.7 437 76.2
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 4.9e-204 714.5 442 75.1
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 6.4e-204 714.1 441 76.9
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 8.4e-204 713.8 442 75.6
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 8.4e-204 713.8 442 76.0
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 5.4e-203 711.1 442 75.1
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 7.1e-203 710.7 436 76.6
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 7.1e-203 710.7 441 75.7
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 3.5e-202 708.4 436 75.7
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 1.8e-201 706.1 436 75.9
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 5.1e-201 704.5 441 75.5
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 1.1e-200 703.4 435 75.9
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.5e-200 703.0 441 76.2
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 4.3e-200 701.4 441 75.3
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 4.3e-200 701.4 441 76.4
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 6.2e-199 697.6 442 73.5
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.4e-198 696.4 437 73.7
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.2e-197 693.3 444 73.4
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 5.8e-197 691.0 442 72.4
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 1.3e-196 689.9 443 72.2
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 1.7e-196 689.5 441 73.9
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.7e-196 689.5 465 73.3
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 2.9e-196 688.7 442 73.1
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.4e-195 686.4 433 74.1
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 2.5e-195 685.6 442 72.6
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 2.7e-194 682.2 447 74.0
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 1.0e-193 680.2 441 73.0
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.3e-193 679.9 442 72.2
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 1.3e-193 679.9 436 73.6
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 3.9e-193 678.3 422 78.4
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.8e-191 671.4 432 73.8
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 6.2e-191 671.0 443 71.3
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 6.2e-191 671.0 442 71.9
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 8.2e-191 670.6 446 72.4
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.4e-190 669.8 463 68.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 6.5e-188 661.0 443 72.7
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 6.5e-188 661.0 447 71.4
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 2.1e-186 656.0 437 72.8
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.3e-185 652.5 432 72.7
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 3.9e-185 651.7 442 69.0
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 5.1e-185 651.4 419 74.9
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 8.7e-185 650.6 442 69.5
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 1.5e-184 649.8 442 69.9
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.5e-184 649.8 402 74.4
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 4.3e-184 648.3 451 68.3
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 1.6e-183 646.4 442 69.5
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 2.8e-183 645.6 416 75.5
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.5e-171 605.9 387 74.2
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.2e-171 605.5 387 73.9
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 7.2e-171 604.4 464 64.9
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 9.4e-171 604.0 653 51.1
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 1.2e-170 603.6 440 65.9
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 2.1e-170 602.8 360 76.4
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 1.0e-169 600.5 444 67.6
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 5.7e-168 594.7 411 69.8
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.4e-166 590.1 341 77.4
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 1.2e-165 587.0 448 65.4
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 3.5e-165 585.5 441 64.9
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 3.5e-165 585.5 351 81.2
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 6.1e-162 574.7 501 63.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 8.0e-162 574.3 383 70.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 1.7e-156 556.6 349 75.9
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.0e-149 533.1 445 60.2
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.0e-148 530.8 442 61.3
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 1.7e-148 530.0 429 58.7
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 2.6e-144 516.2 389 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.4e-137 493.8 440 58.0
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 4.0e-137 492.3 285 83.5
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 5.2e-137 491.9 436 57.6
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.5e-136 490.3 428 58.9
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 4.4e-136 488.8 441 55.8
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 6.3e-135 485.0 339 70.5
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 4.1e-134 482.3 434 58.1
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 5.4e-134 481.9 382 66.0
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 1.5e-128 463.8 279 79.9
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 9.8e-128 461.1 372 58.3
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 4.6e-125 452.2 285 76.1
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 1.7e-124 450.3 280 76.4
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 3.0e-124 449.5 285 75.4
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 1.5e-123 447.2 441 53.5
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.6e-122 443.7 446 53.1
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 2.3e-116 423.3 441 52.4
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 4.9e-111 405.6 286 68.5
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 3.2e-110 402.9 466 44.0
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 7.1e-110 401.7 407 53.8
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 3.3e-107 392.9 441 50.1
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.6e-106 390.6 441 48.8
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 2.9e-103 379.8 287 63.1
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 1.1e-102 377.9 213 83.1
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.4e-102 376.7 213 83.6
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 6.4e-95 352.1 418 48.3
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 3.2e-86 323.2 341 46.0
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.4e-72 276.6 172 77.3
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.4e-72 276.6 172 77.3
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.4e-70 271.2 163 78.5
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.6e-69 267.7 152 81.6
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 1.8e-65 254.2 189 64.6
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 4.2e-62 243.0 152 70.4
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 2.3e-52 210.7 123 77.2
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 9.7e-51 205.3 126 74.6
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 7.0e-49 199.1 127 68.5
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 9.1e-49 198.7 128 71.9
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 4.2e-46 189.9 127 70.9
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 2.7e-45 187.2 289 36.7
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 8.0e-45 185.7 123 65.0
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 7.4e-43 179.1 95 87.4
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 1.1e-41 175.3 174 55.2
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.8e-34 150.6 117 63.2
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 8.3e-34 149.1 105 71.4
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 3.8e-31 140.2 102 60.8
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 8.0e-29 132.5 80 72.5
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 2.0e-27 127.9 107 57.9
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 8.3e-18 95.9 66 74.2
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 3.5e-16 90.5 63 73.0
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.3e-15 88.6 45 88.9
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 1.7e-15 88.2 60 65.0
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 2.3e-15 87.8 69 63.8
CAN.G533.11 Capsicum annuum HOM05D005203 ORTHO05D006383 1.2e-13 82.0 48 70.8
EL10Ac1g01043 Beta vulgaris HOM05D005203 ORTHO05D006383 1.4e-09 68.6 31 87.1


User provided reference genes

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