Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.1e-164 583.2 283 100.0
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 1.6e-102 376.7 280 69.3
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 3.5e-102 375.6 302 67.9
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.7e-99 365.9 282 67.0
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.2e-96 356.3 288 63.9
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 4.8e-96 355.1 296 64.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 4.8e-96 355.1 290 63.8
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.4e-95 353.6 291 62.5
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 3.1e-95 352.4 281 65.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 9.1e-95 350.9 314 57.3
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 9.1e-95 350.9 291 62.9
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 1.6e-94 350.1 296 60.5
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 3.5e-94 349.0 296 63.2
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 5.9e-94 348.2 291 62.9
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.7e-93 346.7 289 62.6
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.7e-93 346.7 188 85.6
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 2.9e-93 345.9 286 63.3
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.9e-93 345.9 289 62.6
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 3.8e-93 345.5 296 59.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 5.0e-93 345.1 284 63.0
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.5e-92 343.6 286 63.6
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.9e-92 343.2 284 62.3
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 5.5e-92 341.7 304 59.5
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.2e-91 340.5 299 61.5
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 1.2e-91 340.5 283 62.5
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 3.6e-91 339.0 291 61.2
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 6.1e-91 338.2 303 59.1
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.1e-91 338.2 299 60.2
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.8e-90 336.7 294 61.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.3e-90 336.3 301 58.1
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 3.0e-90 335.9 294 59.2
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 4.0e-90 335.5 292 58.6
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 4.0e-90 335.5 292 61.0
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 6.8e-90 334.7 290 59.7
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.2e-89 334.0 302 60.3
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.2e-89 334.0 289 61.9
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 1.2e-89 334.0 285 59.3
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 2.6e-89 332.8 289 61.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.4e-89 332.4 288 60.8
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 4.4e-89 332.0 287 58.5
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 5.7e-89 331.6 289 58.5
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 7.5e-89 331.3 194 77.3
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 7.5e-89 331.3 194 77.3
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 7.5e-89 331.3 194 77.3
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 7.5e-89 331.3 194 77.3
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 2.8e-88 329.3 286 61.5
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 3.7e-88 328.9 286 58.7
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 4.9e-88 328.6 243 66.3
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 4.9e-88 328.6 286 59.1
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 4.9e-88 328.6 280 60.7
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 6.3e-88 328.2 288 60.1
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 1.4e-87 327.0 285 60.7
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.8e-87 326.6 190 77.9
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 4.1e-87 325.5 280 60.7
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 9.2e-87 324.3 180 82.2
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.2e-86 323.9 331 54.1
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.2e-86 323.9 283 61.1
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 4.5e-86 322.0 286 60.5
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 7.8e-86 321.2 220 68.2
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 1.3e-85 320.5 187 77.5
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 6.6e-85 318.2 281 60.1
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 5.6e-84 315.1 295 58.3
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.2e-83 313.9 281 58.4
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 3.6e-83 312.4 187 75.4
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 3.0e-82 309.3 183 76.0
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 3.0e-82 309.3 293 55.6
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 3.0e-82 309.3 297 55.9
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 4.0e-82 308.9 183 77.0
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 6.8e-82 308.1 303 56.1
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.2e-81 307.4 291 55.7
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 1.5e-81 307.0 300 55.7
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.7e-80 303.5 303 55.4
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 3.7e-80 302.4 311 53.7
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 6.4e-80 301.6 302 56.0
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 8.3e-80 301.2 171 80.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 2.0e-78 296.6 183 71.6
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.1e-76 290.8 335 48.7
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 6.2e-75 285.0 228 64.0
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 4.0e-74 282.3 207 65.2
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 8.9e-74 281.2 285 54.0
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 2.0e-73 280.0 228 61.8
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 2.0e-73 280.0 165 75.2
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.3e-72 277.3 291 54.6
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.7e-72 275.8 294 53.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.1e-71 274.2 165 77.6
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 1.9e-71 273.5 156 81.4
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 1.2e-70 270.8 161 78.3
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 7.8e-70 268.1 156 80.1
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.3e-69 266.5 172 69.8
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.6e-67 260.4 232 62.5
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 8.9e-66 254.6 244 55.3
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.2e-62 244.2 229 56.8
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 2.3e-61 240.0 148 76.4
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 2.5e-60 236.5 215 55.8
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 7.3e-60 235.0 166 65.1
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.5e-57 227.3 242 52.5
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 5.8e-57 225.3 206 51.5
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 4.1e-55 219.2 211 49.8
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 4.1e-55 219.2 194 53.1
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 7.1e-55 218.4 196 54.6
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 4.3e-52 209.1 298 45.3
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 9.0e-50 201.4 172 59.9
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.3e-48 197.6 181 49.2
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 4.6e-46 189.1 174 55.2
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 6.9e-42 175.3 98 79.6
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.0e-42 174.9 287 40.8
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.4e-41 172.9 294 41.5
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 4.5e-41 172.6 266 39.5
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.9e-40 169.9 112 71.4
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 6.4e-40 168.7 199 45.7
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 2.1e-35 153.7 185 41.1
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 1.9e-31 140.6 176 39.8
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 2.3e-21 107.1 72 63.9
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.4e-10 71.2 43 72.1
Oeu048435.1 Olea europaea HOM05D006942 ORTHO05D008737 6.9e-10 68.9 131 45.8
Nitab4.5_0000001g0050 Nicotiana tabacum HOM05D006942 ORTHO05D008737 5.0e-08 62.8 131 37.4
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 3.2e-07 60.1 62 38.7
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.1e-06 57.4 39 64.1


User provided reference genes

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