Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 3.9e-205 718.0 383 100.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 2.8e-171 605.5 356 81.7
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.6e-169 599.0 355 87.6
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 2.9e-168 595.5 357 85.7
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 5.4e-167 591.3 355 82.5
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.4e-162 576.6 355 78.9
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 5.8e-161 571.2 370 74.1
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 1.7e-160 569.7 355 80.3
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.7e-152 543.1 355 70.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.9e-151 539.7 355 71.5
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.2e-151 538.9 355 71.3
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.1e-151 537.7 355 71.0
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 1.8e-149 533.1 355 70.1
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.3e-149 532.7 355 72.1
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.3e-149 532.7 355 70.4
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.9e-148 529.6 357 73.4
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.9e-148 529.6 361 70.6
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 4.3e-148 528.5 355 76.1
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 5.7e-148 528.1 340 76.2
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.3e-147 526.9 361 70.6
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.6e-147 526.6 356 71.9
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 8.2e-147 524.2 355 75.8
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.8e-146 523.1 362 69.3
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 2.4e-146 522.7 361 70.4
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 4.1e-146 521.9 355 69.3
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 6.9e-146 521.2 355 75.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.2e-145 520.4 356 71.1
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.0e-145 519.6 355 71.3
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.6e-145 519.2 355 71.3
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 3.4e-145 518.8 362 72.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.8e-145 518.1 356 70.2
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.6e-145 517.7 356 70.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 1.0e-144 517.3 355 69.6
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.3e-144 516.9 355 68.7
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.3e-144 516.9 355 69.3
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.3e-144 516.9 355 69.3
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.9e-144 515.8 356 71.1
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 3.8e-144 515.4 361 69.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 8.4e-144 514.2 355 68.7
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 8.4e-144 514.2 359 72.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.4e-144 514.2 355 73.8
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 1.9e-143 513.1 355 74.9
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.9e-143 513.1 355 72.7
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.9e-143 513.1 355 73.5
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.2e-143 512.3 355 73.5
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 3.2e-143 512.3 355 69.0
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 3.2e-143 512.3 355 72.7
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 4.2e-143 511.9 355 73.5
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.5e-143 511.5 355 71.0
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 5.5e-143 511.5 356 68.8
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 7.2e-143 511.1 355 71.0
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 7.2e-143 511.1 355 69.6
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.2e-142 510.4 355 68.5
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.2e-142 510.4 357 68.6
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.6e-142 510.0 355 71.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 3.5e-142 508.8 361 73.1
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 3.5e-142 508.8 356 72.5
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.5e-142 508.8 355 67.0
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 4.6e-142 508.4 366 72.7
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.6e-142 508.4 355 68.7
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 6.1e-142 508.1 359 73.3
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 6.1e-142 508.1 355 69.6
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 7.9e-142 507.7 355 67.6
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 7.9e-142 507.7 355 68.2
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.0e-141 507.3 355 67.0
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.3e-141 506.9 355 67.9
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.3e-141 506.9 355 67.0
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.8e-141 506.5 356 67.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.3e-141 506.1 362 67.1
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 2.3e-141 506.1 355 72.7
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.0e-141 505.8 356 66.9
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.0e-141 505.8 356 66.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 3.0e-141 505.8 349 73.4
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 3.9e-141 505.4 362 66.9
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 5.1e-141 505.0 355 67.3
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.5e-140 503.4 355 67.3
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 4.3e-140 501.9 356 70.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.3e-140 501.9 355 66.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 7.4e-140 501.1 355 71.3
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 9.7e-140 500.7 355 69.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 9.7e-140 500.7 356 72.2
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 1.3e-139 500.4 361 65.7
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.6e-139 500.0 355 66.8
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.6e-139 500.0 361 67.0
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 4.8e-139 498.4 364 71.4
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 6.9e-138 494.6 355 66.5
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 9.0e-138 494.2 357 70.9
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 9.0e-138 494.2 361 70.4
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 9.0e-138 494.2 355 66.8
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-137 493.0 361 70.4
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 4.5e-137 491.9 355 71.0
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.0e-136 490.7 355 64.8
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.3e-136 490.3 358 69.8
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 2.2e-136 489.6 359 69.9
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 5.0e-136 488.4 356 70.2
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.4e-135 486.9 398 60.3
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.4e-135 486.9 357 69.7
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.9e-135 486.5 355 64.5
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.2e-135 484.6 349 66.5
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.2e-134 483.8 360 63.9
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.6e-134 483.4 359 64.6
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 3.6e-134 482.3 356 64.0
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.6e-134 481.9 355 63.9
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.1e-134 481.5 355 64.2
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 6.1e-134 481.5 355 68.7
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-133 479.9 356 65.4
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.8e-133 479.9 362 67.4
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 5.1e-133 478.4 356 62.6
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.3e-132 475.3 360 62.2
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 4.3e-132 475.3 356 66.0
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 5.7e-132 474.9 355 62.8
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 2.8e-131 472.6 364 61.8
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 8.2e-131 471.1 355 65.1
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 5.3e-130 468.4 360 67.8
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 5.3e-130 468.4 355 65.4
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 9.1e-130 467.6 338 65.1
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.0e-129 466.5 355 65.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.6e-129 466.1 359 67.1
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.6e-129 466.1 358 60.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 5.0e-128 461.8 356 61.8
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.2e-127 459.1 361 60.7
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 5.5e-127 458.4 355 63.1
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 3.6e-126 455.7 356 60.4
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 3.7e-123 445.7 357 59.4
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.6e-121 440.3 355 58.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 3.2e-119 432.6 356 59.8
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 8.0e-118 427.9 355 56.3
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.5e-116 423.7 355 56.3
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 9.7e-116 421.0 355 55.2
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.4e-114 417.2 308 67.9
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.6e-110 403.7 292 65.4
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.1e-106 389.4 356 61.0
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.6e-100 369.8 298 62.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.7e-99 367.1 278 70.5
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 3.1e-98 362.8 355 54.6
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.9e-95 353.6 331 55.0
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.0e-92 343.6 298 56.4
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.4e-75 285.4 213 67.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.7e-72 277.3 355 41.4
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.3e-67 261.2 245 56.7
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 4.1e-66 256.1 357 40.9
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 3.5e-65 253.1 273 48.0
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.6e-57 227.6 157 65.6
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.0e-57 225.7 178 64.6
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 1.1e-55 221.5 357 40.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.3e-54 218.0 115 87.0
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.6e-52 208.8 126 77.0
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 6.4e-51 205.7 125 72.8
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.2e-35 154.1 193 40.9
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 6.7e-32 142.5 134 68.7
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-29 135.2 85 64.7
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-29 134.0 85 64.7
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-29 132.9 85 63.5
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-28 131.3 106 63.2
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-27 127.1 85 61.2
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.1e-26 125.2 139 43.2
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.1e-26 125.2 189 37.6
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 6.7e-24 115.9 193 37.3
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-22 111.7 58 87.9
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-22 111.7 59 86.4
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.3e-22 111.7 59 86.4
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.2e-22 110.9 63 82.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 2.0e-20 104.4 75 69.3
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.3e-19 101.7 61 73.8
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 4.2e-18 96.7 76 63.2
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 9.4e-18 95.5 55 78.2
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 6.1e-17 92.8 149 33.6
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.7e-14 84.7 76 53.9
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.3e-14 82.8 59 61.0
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 6.9e-13 79.3 49 67.3
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 6.9e-13 79.3 84 54.8
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-11 75.5 81 49.4
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-11 75.1 39 71.8
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 5.0e-11 73.2 150 28.7
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.4e-10 71.6 50 62.0
SGA_v2.0_scaffold373G50208 Striga asiatica HOM05D003641 ORTHO05D404367 7.9e-09 65.9 46 76.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 2.3e-08 64.3 68 42.6
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 6.7e-08 62.8 49 59.2
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.5e-07 61.6 84 42.9
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 3.7e-06 57.0 159 27.0
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 4.8e-06 56.6 99 38.4


User provided reference genes

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