Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.7e-199 699.1 354 100.0
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.0e-159 567.0 352 78.4
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 2.0e-155 552.7 370 75.7
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 1.3e-154 550.1 357 77.0
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.1e-150 537.0 356 75.3
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.5e-150 536.6 356 73.9
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 3.6e-149 531.9 356 74.4
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 1.8e-148 529.6 356 73.9
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 6.4e-146 521.2 353 73.1
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.1e-145 520.4 402 66.7
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 4.1e-145 518.5 403 66.5
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 5.4e-145 518.1 352 75.9
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 9.2e-145 517.3 358 72.3
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.6e-144 516.5 404 66.1
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 2.1e-144 516.2 354 72.0
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 2.7e-144 515.8 359 71.9
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 7.8e-144 514.2 355 73.8
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 2.3e-143 512.7 398 65.1
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 3.0e-143 512.3 355 73.5
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 8.6e-143 510.8 355 73.2
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.6e-141 506.5 359 70.8
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 2.1e-141 506.1 384 68.0
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 2.8e-141 505.8 365 69.9
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 3.6e-141 505.4 410 64.6
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 3.6e-141 505.4 359 70.5
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 1.8e-140 503.1 355 71.8
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 1.8e-140 503.1 352 72.7
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 4.0e-140 501.9 377 69.2
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 8.9e-140 500.7 341 73.6
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 1.5e-139 500.0 355 71.8
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 2.6e-139 499.2 355 71.8
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 2.4e-137 492.7 349 70.5
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 3.2e-137 492.3 354 70.3
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 4.1e-137 491.9 354 70.1
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 4.1e-137 491.9 354 70.6
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 4.1e-137 491.9 354 69.8
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.2e-136 490.3 354 69.8
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 1.2e-136 490.3 354 70.3
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.6e-136 490.0 354 69.8
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 1.6e-136 490.0 405 63.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.6e-136 490.0 353 69.4
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 6.0e-136 488.0 356 67.1
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 1.1e-134 483.8 353 68.0
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 4.3e-134 481.9 411 62.3
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 5.6e-134 481.5 356 68.3
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 9.6e-134 480.7 356 68.8
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 2.8e-133 479.2 366 67.5
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 3.6e-133 478.8 353 67.7
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 9.0e-132 474.2 345 69.6
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 1.2e-131 473.8 368 65.8
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 1.5e-131 473.4 356 67.7
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 2.0e-131 473.0 351 67.2
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 4.4e-131 471.9 417 61.2
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 4.9e-130 468.4 380 62.6
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 4.9e-130 468.4 390 63.8
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.4e-129 466.8 355 66.8
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 3.2e-129 465.7 397 62.2
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 4.2e-129 465.3 453 55.6
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 5.4e-129 464.9 317 72.2
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 7.1e-129 464.5 342 67.3
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 1.2e-128 463.8 339 67.3
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 1.6e-128 463.4 446 58.1
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 2.7e-128 462.6 396 60.6
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.0e-127 460.7 396 60.6
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 1.3e-127 460.3 379 61.7
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 1.7e-127 459.9 396 60.9
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 3.0e-127 459.1 356 65.7
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.5e-126 456.1 350 66.0
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 3.6e-125 452.2 375 63.5
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 4.8e-125 451.8 394 61.4
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 6.2e-125 451.4 402 59.7
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 6.2e-125 451.4 402 60.2
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 8.1e-125 451.1 407 59.2
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.1e-124 450.7 399 59.6
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.1e-124 450.7 402 60.2
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 1.8e-124 449.9 406 59.1
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.8e-124 449.9 307 71.0
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 5.3e-124 448.4 404 59.7
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 5.3e-124 448.4 298 76.5
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 9.0e-124 447.6 351 65.5
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 9.0e-124 447.6 342 64.6
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 5.8e-123 444.9 334 67.4
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 5.8e-123 444.9 404 58.4
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 2.2e-122 443.0 392 59.7
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 2.2e-122 443.0 392 59.7
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 1.2e-120 437.2 350 63.4
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 3.5e-120 435.6 372 61.8
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.0e-119 434.1 342 63.5
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 3.9e-119 432.2 350 64.3
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 5.1e-119 431.8 332 65.4
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 8.1e-117 424.5 309 69.3
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 1.4e-116 423.7 360 61.7
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 9.9e-115 417.5 360 61.1
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 4.9e-114 415.2 361 58.2
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 1.1e-113 414.1 367 60.8
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.8e-111 406.8 350 60.3
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 6.7e-111 404.8 359 60.2
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 1.9e-110 403.3 355 60.3
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 3.1e-108 396.0 360 58.3
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.8e-107 391.7 338 60.1
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.0e-106 391.0 338 59.8
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.3e-106 390.6 338 59.8
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.7e-106 390.2 338 59.8
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 6.5e-106 388.3 291 66.7
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 6.5e-106 388.3 291 66.7
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-105 387.5 338 59.5
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 7.6e-99 364.8 363 56.7
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 5.0e-98 362.1 314 56.7
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 7.2e-97 358.2 358 53.4
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 3.7e-93 345.9 360 51.7
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 2.4e-92 343.2 270 64.8
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.1e-89 334.3 213 76.5
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 3.4e-83 312.8 311 51.4
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 3.9e-79 299.3 355 48.5
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 4.8e-77 292.4 235 63.0
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.2e-72 277.7 214 65.4
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 2.2e-69 266.9 216 61.6
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 6.6e-58 228.8 253 51.0
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 1.2e-54 218.0 385 36.6
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 1.1e-52 211.5 151 69.5
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.2e-51 208.0 150 68.0
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 3.8e-50 203.0 142 71.8
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.4e-46 189.5 128 71.1
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 2.7e-43 180.3 124 71.8
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 5.0e-42 176.0 136 62.5
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.8e-39 167.5 115 71.3
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 1.3e-29 134.8 79 79.7
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 9.9e-22 108.6 73 71.2
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 3.8e-21 106.7 142 47.2
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.7e-13 81.3 64 65.6
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 5.4e-12 76.3 349 22.9
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 5.1e-10 69.7 72 48.6
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 6.2e-08 62.8 50 66.0
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 8.1e-08 62.4 49 67.3


User provided reference genes

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