Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 5.7e-101 370.9 190 100.0
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 4.0e-46 188.7 177 62.1
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 4.0e-38 162.2 176 54.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.2e-23 113.2 190 41.1
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.2e-23 113.2 190 41.1
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 1.1e-22 110.9 174 45.4
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 9.0e-22 107.8 170 45.9
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 3.4e-21 105.9 157 49.0
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 5.9e-21 105.1 176 43.2
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 2.9e-20 102.8 168 42.3
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 5.0e-20 102.1 160 43.1
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.5e-20 101.7 169 39.6
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 6.5e-20 101.7 166 43.4
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 2.5e-19 99.8 166 41.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 4.2e-19 99.0 163 41.7
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 5.5e-19 98.6 187 39.6
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 7.2e-19 98.2 163 41.7
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.2e-18 97.4 163 40.5
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 4.6e-18 95.5 159 43.4
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.6e-18 95.5 186 39.2
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 6.1e-18 95.1 159 42.8
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.8e-17 93.6 168 39.9
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.3e-17 93.2 180 40.0
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 5.1e-17 92.0 181 39.2
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 6.7e-17 91.7 162 40.7
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.0e-16 90.1 168 39.3
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 2.5e-16 89.7 175 37.1
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 3.3e-16 89.4 189 39.7
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 4.3e-16 89.0 168 39.9
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 5.7e-16 88.6 159 39.6
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 1.3e-15 87.4 168 38.7
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 2.2e-15 86.7 172 34.9
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 2.2e-15 86.7 161 39.8
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 2.8e-15 86.3 163 38.0
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 2.8e-15 86.3 186 36.0
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.7e-15 85.9 188 35.6
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 4.8e-15 85.5 121 45.5
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 1.1e-14 84.3 170 38.8
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.1e-14 84.3 183 35.5
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.4e-14 84.0 162 40.7
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.8e-14 83.6 153 39.9
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.8e-14 83.6 167 37.1
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 2.4e-14 83.2 179 34.6
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 3.1e-14 82.8 154 38.3
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 3.1e-14 82.8 190 38.4
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 5.3e-14 82.0 162 40.1
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 9.1e-14 81.3 186 34.9
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.2e-13 80.9 183 37.2
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 1.5e-13 80.5 163 39.9
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 2.0e-13 80.1 165 36.4
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 4.5e-13 79.0 158 37.3
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 7.7e-13 78.2 157 36.9
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.9e-12 76.3 192 33.3
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 1.4e-11 73.9 168 36.9
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.5e-11 73.2 147 38.1
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 4.2e-11 72.4 123 39.0
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 5.5e-11 72.0 98 39.8
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 7.2e-11 71.6 91 42.9
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 2.1e-10 70.1 93 43.0
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 2.7e-10 69.7 170 34.1
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 3.6e-10 69.3 175 30.9
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 4.7e-10 68.9 168 33.9
unitig_8.g3919 Utricularia gibba HOM05D008113 ORTHO05D009793 4.7e-10 68.9 74 55.4
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 6.1e-10 68.6 158 38.0
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 1.0e-09 67.8 171 33.9
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 2.3e-09 66.6 197 31.5
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 6.7e-09 65.1 164 32.9
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 4.4e-08 62.4 111 39.6
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 4.4e-08 62.4 168 31.0
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 7.4e-08 61.6 137 35.8
SGA_v2.0_scaffold89G27590 Striga asiatica HOM05D000681 ORTHO05D009793 9.7e-08 61.2 60 50.0
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 1.1e-06 57.8 180 28.9
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 1.1e-06 57.8 165 30.9
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 2.4e-06 56.6 93 39.8
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 4.1e-06 55.8 92 37.0


User provided reference genes

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