Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 1.3e-174 616.3 317 100.0
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 3.3e-77 292.7 273 55.3
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 6.9e-67 258.5 308 45.8
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 7.6e-66 255.0 315 47.3
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 2.9e-65 253.1 286 49.0
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 3.8e-65 252.7 281 48.8
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 3.6e-63 246.1 286 47.2
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 1.4e-59 234.2 294 43.5
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 2.4e-59 233.4 280 46.8
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 9.1e-59 231.5 302 43.0
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 1.5e-58 230.7 278 43.5
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 4.5e-58 229.2 283 42.8
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 4.8e-52 209.1 282 42.2
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 1.0e-49 201.4 300 38.0
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 5.0e-49 199.1 278 38.8
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 3.6e-47 193.0 256 44.1
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 4.7e-47 192.6 287 37.6
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 1.4e-46 191.0 276 39.5
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 6.7e-46 188.7 325 36.9
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 2.6e-45 186.8 284 39.8
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 7.4e-45 185.3 285 37.2
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 3.7e-44 183.0 280 38.9
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.4e-43 181.0 325 36.0
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 3.1e-43 179.9 321 36.1
SalBow5G5388 Salvia bowleyana HOM05D007655 ORTHO05D009698 9.1e-43 178.3 303 40.6
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 2.0e-42 177.2 321 35.8
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 2.0e-42 177.2 276 38.0
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 4.5e-42 176.0 286 36.7
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 7.7e-42 175.3 326 34.7
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 7.7e-42 175.3 326 34.7
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.0e-41 174.9 284 35.6
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 1.3e-41 174.5 282 36.5
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 1.3e-41 174.5 282 36.5
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 2.5e-40 170.2 324 34.3
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 7.2e-40 168.7 319 34.8
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 9.4e-40 168.3 284 35.9
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 3.6e-39 166.4 321 34.9
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 6.1e-39 165.6 319 34.5
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 1.0e-38 164.9 319 34.2
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 5.2e-38 162.5 318 32.7
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 3.3e-37 159.8 284 34.9
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 4.4e-37 159.5 311 34.1
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 5.7e-37 159.1 285 35.1
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.7e-36 157.5 289 36.3
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 1.4e-35 154.5 299 34.8
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 4.1e-35 152.9 285 33.0
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 5.3e-35 152.5 281 33.5
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 7.0e-35 152.1 285 34.0
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 2.0e-34 150.6 286 32.2
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 6.1e-31 139.0 285 31.9
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 6.1e-31 139.0 317 30.9
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 1.8e-30 137.5 275 33.5
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 1.8e-30 137.5 282 34.0
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 2.3e-30 137.1 189 41.8
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 3.0e-30 136.7 302 30.8
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 6.8e-30 135.6 159 44.0
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 6.8e-30 135.6 279 31.5
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 1.5e-29 134.4 324 30.9
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 4.4e-29 132.9 288 31.2
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 1.3e-28 131.3 314 29.6
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 2.8e-28 130.2 261 32.6
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 4.8e-28 129.4 285 31.2
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 4.8e-28 129.4 285 31.2
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 6.3e-28 129.0 310 29.7
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 1.4e-27 127.9 279 32.3
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 1.8e-27 127.5 283 30.4
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 2.7e-26 123.6 281 32.0
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 4.5e-26 122.9 284 31.7
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 4.5e-26 122.9 276 31.9
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 4.5e-26 122.9 262 32.4
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.7e-25 120.9 281 31.7
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 1.1e-24 118.2 236 34.7
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 1.9e-24 117.5 285 29.1
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 1.9e-24 117.5 298 30.5
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 3.2e-24 116.7 176 38.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 1.2e-23 114.8 281 31.0
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 1.6e-23 114.4 285 28.8
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 1.8e-22 110.9 285 28.4
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 5.2e-22 109.4 158 38.6
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 5.2e-22 109.4 283 28.6
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 1.7e-20 104.4 286 27.6
arahy.Tifrunner.gnm1.ann1.L8T4NM Arachis hypogaea HOM05D007655 ORTHO05D009698 2.4e-19 100.5 149 39.6
ATR0030G034 Amborella trichopoda HOM05D007655 ORTHO05D009698 5.4e-19 99.4 275 25.1
CDE06G0331 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 5.4e-19 99.4 284 27.8
Haze_17251 Corylus avellana HOM05D007655 ORTHO05D009698 9.2e-19 98.6 134 41.8
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 2.0e-18 97.4 282 28.0
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 6.6e-17 92.4 189 33.9
SEGI_06165 Sequoiadendron giganteum HOM05D007655 ORTHO05D009698 9.5e-16 88.6 214 28.5
Haze_17252 Corylus avellana HOM05D007655 ORTHO05D009698 6.4e-12 75.9 109 45.9
CDE12G0438 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 2.4e-11 73.9 122 34.4
ATR0174G045 Amborella trichopoda HOM05D007655 ORTHO05D009698 4.1e-11 73.2 131 33.6
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 5.4e-11 72.8 77 48.1
CDE04G2579 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 1.1e-08 65.1 108 38.0
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 2.5e-08 63.9 136 30.9
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 2.5e-08 63.9 285 24.9
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 4.3e-08 63.2 115 33.0
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 5.6e-08 62.8 115 33.0
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 5.6e-08 62.8 115 33.0
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 5.6e-08 62.8 239 23.8
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 7.3e-08 62.4 115 33.0
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 1.6e-07 61.2 117 32.5
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 1.6e-07 61.2 233 24.0
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 1.6e-07 61.2 115 33.0
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.1e-07 60.8 117 33.3
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 4.7e-07 59.7 117 32.5
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 1.1e-06 58.5 116 33.6
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.4e-06 58.2 170 27.6
CDE12G0145 Ceratophyllum demersum HOM05D007655 ORTHO05D009698 8.9e-06 55.5 55 49.1


User provided reference genes

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