Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 2.7e-74 282.0 149 100.0
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.4e-54 216.5 128 79.7
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 2.4e-54 215.7 129 80.6
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.0e-53 212.6 126 79.4
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.5e-53 211.8 150 74.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 7.8e-53 210.7 143 74.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.3e-52 209.9 131 79.4
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.9e-52 208.4 129 74.4
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 3.9e-52 208.4 124 79.0
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 6.6e-52 207.6 148 68.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.6e-52 207.6 126 77.0
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 6.6e-52 207.6 127 74.8
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 2.5e-51 205.7 126 76.2
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 4.3e-51 204.9 129 76.0
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 5.6e-51 204.5 126 77.0
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 7.3e-51 204.1 143 73.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 7.3e-51 204.1 126 76.2
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.8e-50 202.2 129 76.0
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.8e-50 202.2 126 75.4
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.2e-50 201.1 126 74.6
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 6.2e-50 201.1 123 76.4
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 6.2e-50 201.1 131 74.0
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 8.0e-50 200.7 142 72.5
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.1e-49 200.3 126 73.0
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.1e-49 200.3 121 80.2
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.4e-49 199.9 127 76.4
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 1.4e-49 199.9 127 76.4
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.8e-49 199.5 126 73.8
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.3e-49 199.1 129 75.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 4.0e-49 198.4 125 74.4
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.0e-49 198.4 144 72.9
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 4.0e-49 198.4 127 74.8
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 5.2e-49 198.0 131 75.6
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 5.2e-49 198.0 133 70.7
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 6.8e-49 197.6 136 75.0
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 2.0e-48 196.1 110 80.9
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.3e-47 193.4 126 73.0
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 1.7e-47 193.0 131 70.2
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.7e-47 193.0 149 66.4
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.2e-47 192.6 127 72.4
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.2e-47 192.6 125 75.2
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 6.4e-47 191.0 100 87.0
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 8.3e-47 190.7 129 69.0
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.1e-46 190.3 148 69.6
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 1.1e-46 190.3 125 72.8
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.4e-46 189.9 120 74.2
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 1.9e-46 189.5 144 70.1
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.1e-46 188.3 130 70.0
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 4.1e-46 188.3 152 65.8
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 5.4e-46 188.0 127 70.1
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.2e-45 186.8 126 72.2
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 4.6e-45 184.9 112 75.9
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 6.0e-45 184.5 143 65.0
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 6.0e-45 184.5 128 66.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 6.0e-45 184.5 110 76.4
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 1.0e-44 183.7 131 66.4
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.7e-44 183.0 128 65.6
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.7e-44 183.0 126 68.3
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.7e-44 183.0 127 67.7
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.7e-44 183.0 147 65.3
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 6.6e-44 181.0 110 74.5
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 8.6e-44 180.6 146 65.8
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 1.1e-43 180.3 119 69.7
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-43 180.3 119 69.7
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.5e-43 179.9 151 64.2
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.5e-43 179.1 110 73.6
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 8.1e-42 174.1 129 63.6
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 8.1e-42 174.1 130 70.8
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 8.1e-42 174.1 125 65.6
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.4e-41 173.3 131 63.4
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.8e-41 172.9 129 62.8
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.8e-41 172.9 142 63.4
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.8e-41 172.9 143 61.5
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 3.1e-41 172.2 129 61.2
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 3.1e-41 172.2 129 60.5
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.1e-41 172.2 144 61.8
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 3.1e-41 172.2 104 76.0
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 3.1e-41 172.2 104 76.0
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 5.2e-41 171.4 132 62.1
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 5.2e-41 171.4 129 62.8
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.2e-41 171.4 131 61.8
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-41 171.4 131 61.8
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-41 171.4 131 61.8
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.2e-41 171.4 131 61.8
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 8.9e-41 170.6 129 61.2
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 8.9e-41 170.6 170 54.1
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 8.9e-41 170.6 117 66.7
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.2e-40 170.2 129 60.5
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.2e-40 170.2 130 61.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.5e-40 169.9 129 62.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.5e-40 169.9 114 69.3
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.5e-40 169.9 142 62.0
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 2.0e-40 169.5 130 60.8
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 2.6e-40 169.1 142 61.3
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 3.4e-40 168.7 130 61.5
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 4.4e-40 168.3 143 63.6
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.7e-39 166.4 142 63.4
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.7e-39 166.4 142 62.0
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.7e-39 166.4 128 62.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 2.2e-39 166.0 142 58.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.9e-39 165.6 128 62.5
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 3.7e-39 165.2 142 63.4
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.1e-38 163.7 179 49.7
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.9e-38 162.9 118 64.4
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.2e-38 162.2 144 60.4
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 4.1e-38 161.8 107 73.8
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.4e-38 161.4 142 59.9
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.0e-36 157.1 98 71.4
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.3e-36 156.0 131 58.8
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 8.6e-36 154.1 120 60.8
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.5e-35 153.3 111 67.6
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 7.3e-35 151.0 87 80.5
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.2e-33 144.8 119 59.7
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 3.4e-32 142.1 141 59.6
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.3e-31 140.2 84 76.2
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.3e-27 125.2 97 54.6
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-26 123.6 83 65.1
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 4.7e-26 121.7 101 53.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.2e-24 117.1 61 86.9
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 7.6e-24 114.4 97 52.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.3e-23 113.6 101 50.5
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.9e-22 109.8 61 82.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 1.3e-20 103.6 98 50.0
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 6.6e-20 101.3 61 73.8
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.8e-18 95.9 61 70.5
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 9.9e-16 87.4 66 59.1
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 3.8e-15 85.5 88 52.3
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 6.4e-15 84.7 57 66.7
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 8.4e-15 84.3 68 58.8
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.4e-14 83.6 85 57.6
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.4e-14 82.8 67 61.2
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.7e-13 79.3 69 59.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.0e-12 77.4 64 64.1
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.3e-12 77.0 49 71.4
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.3e-11 72.4 71 46.5
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 4.5e-08 62.0 101 26.7
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 3.8e-07 58.9 96 30.2
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 3.2e-06 55.8 34 67.6


User provided reference genes

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