Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 7.9e-62 240.4 128 100.0
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 3.0e-53 211.8 128 84.4
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 2.1e-51 205.7 128 82.8
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 4.5e-49 198.0 130 80.8
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 5.8e-49 197.6 130 80.0
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.0e-48 196.8 129 79.8
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 2.9e-48 195.3 134 77.6
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.5e-47 192.2 130 76.9
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 2.5e-47 192.2 128 79.7
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 2.1e-46 189.1 133 73.7
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 2.1e-46 189.1 134 74.6
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 2.1e-46 189.1 134 74.6
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 6.1e-46 187.6 122 76.2
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 1.0e-45 186.8 135 77.0
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.5e-44 183.0 131 76.3
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 1.5e-44 183.0 130 72.3
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 7.4e-44 180.6 128 72.7
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 7.4e-44 180.6 130 72.3
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 1.3e-43 179.9 130 72.3
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.3e-43 179.9 130 71.5
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.8e-43 178.7 130 70.8
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 4.8e-43 177.9 130 71.5
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 6.3e-43 177.6 127 71.7
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.8e-42 176.0 138 67.4
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 3.1e-42 175.3 137 70.8
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 6.9e-42 174.1 136 66.9
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 6.9e-42 174.1 138 65.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 1.2e-41 173.3 138 69.6
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 2.6e-41 172.2 135 66.7
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 2.6e-41 172.2 129 72.1
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 2.6e-41 172.2 129 72.1
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 4.5e-41 171.4 137 65.7
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 7.7e-41 170.6 143 64.3
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 2.2e-40 169.1 128 71.1
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 5.0e-40 167.9 132 68.2
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 8.5e-40 167.2 136 66.9
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 1.1e-39 166.8 120 71.7
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 1.1e-39 166.8 131 66.4
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 1.4e-39 166.4 132 65.2
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 3.2e-39 165.2 138 65.2
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 9.4e-39 163.7 135 63.7
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 9.4e-39 163.7 134 65.7
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 2.7e-38 162.2 136 64.7
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 3.6e-38 161.8 134 64.9
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 7.9e-38 160.6 136 62.5
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.0e-37 160.2 138 60.1
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.0e-37 160.2 130 63.8
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 1.4e-37 159.8 132 64.4
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 1.4e-37 159.8 140 61.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.4e-37 159.8 115 72.2
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 3.0e-37 158.7 124 66.1
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 3.0e-37 158.7 131 61.8
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 3.0e-37 158.7 130 64.6
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 3.0e-37 158.7 139 61.9
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.9e-37 158.3 137 58.4
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 3.9e-37 158.3 137 60.6
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 5.1e-37 157.9 133 60.9
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 5.1e-37 157.9 133 60.9
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 5.1e-37 157.9 111 73.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 5.1e-37 157.9 110 73.6
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 1.1e-36 156.8 134 61.2
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 1.5e-36 156.4 133 60.9
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.3e-36 154.8 135 64.4
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 4.3e-36 154.8 124 68.5
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.7e-36 154.5 124 69.4
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 5.7e-36 154.5 133 60.2
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.7e-36 154.5 136 62.5
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 5.7e-36 154.5 136 62.5
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 5.7e-36 154.5 134 61.9
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 7.4e-36 154.1 132 59.8
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.8e-35 152.1 127 66.1
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 3.7e-35 151.8 122 67.2
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 6.3e-35 151.0 125 64.8
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 1.1e-34 150.2 136 59.6
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.4e-34 149.8 125 66.4
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 1.8e-34 149.4 127 66.9
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.4e-34 149.1 124 66.1
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 9.1e-34 147.1 128 59.4
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 7.7e-33 144.1 121 62.8
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 1.0e-32 143.7 127 58.3
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.3e-32 143.3 130 60.8
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 2.9e-32 142.1 121 60.3
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 1.4e-31 139.8 113 65.5
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 3.2e-31 138.7 119 60.5
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 5.5e-31 137.9 121 61.2
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.2e-30 136.7 136 55.1
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.2e-30 136.7 122 59.0
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 4.7e-30 134.8 117 62.4
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.0e-29 133.7 128 58.6
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 5.1e-29 131.3 114 57.9
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 8.8e-29 130.6 96 70.8
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 3.7e-27 125.2 118 58.5
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 7.0e-26 120.9 110 62.7
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 3.5e-25 118.6 106 59.4
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.7e-24 116.3 134 50.0
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.5e-23 113.2 95 67.4
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.6e-20 102.4 129 46.5
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 5.7e-20 101.3 124 46.8
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 4.5e-17 91.7 130 40.0
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 4.7e-14 81.6 128 41.4
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.9e-07 59.7 51 64.7
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 7.2e-07 57.8 70 50.0


User provided reference genes

Program Settings