Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19550 Avicennia marina HOM05D008202 ORTHO05D010302 9.3e-50 199.9 101 100.0
Oeu018577.1 Olea europaea HOM05D008202 ORTHO05D010302 2.8e-30 135.2 98 68.4
Migut.K00545 Erythranthe guttata HOM05D008202 ORTHO05D010302 7.9e-25 117.1 101 61.4
SGA_v2.0_scaffold512G52633 Striga asiatica HOM05D008202 ORTHO05D010302 1.1e-23 113.2 102 61.8
Dinv42250 Davidia involucrata HOM05D008202 ORTHO05D010302 4.8e-22 107.8 97 58.8
Hma1.2p1_0386F.1_g141760 Hydrangea macrophylla HOM05D008202 ORTHO05D010302 6.9e-21 104.0 97 54.6
CSS0001567 Camellia sinensis var. sinensis HOM05D008202 ORTHO05D010302 1.1e-18 96.7 95 51.6
Dinv36682 Davidia involucrata HOM05D008202 ORTHO05D010302 5.5e-18 94.4 70 62.9
Cc06_g10540 Coffea canephora HOM05D008202 ORTHO05D010302 2.1e-17 92.4 101 53.5
Prupe.7G218700 Prunus persica HOM05D008202 ORTHO05D010302 4.7e-17 91.3 96 53.1
Thecc.09G099700 Theobroma cacao HOM05D008202 ORTHO05D010302 6.1e-17 90.9 97 52.6
Ciclev10010342m.g Citrus clementina HOM05D008202 ORTHO05D010302 1.0e-16 90.1 58 70.7
TWI63G1052 Tripterygium wilfordii HOM05D008202 ORTHO05D010302 1.0e-16 90.1 93 53.8
Haze_25829 Corylus avellana HOM05D008202 ORTHO05D010302 3.0e-16 88.6 98 51.0
Peaxi162Scf00720g00418 Petunia axillaris HOM05D008202 ORTHO05D010302 3.0e-16 88.6 97 51.5
Actinidia39781 Actinidia chinensis HOM05D008202 ORTHO05D010302 5.1e-16 87.8 98 48.0
MD02G1066600 Malus domestica HOM05D008202 ORTHO05D010302 5.1e-16 87.8 94 54.3
Rhsim05G0039400 Rhododendron simsii HOM05D008202 ORTHO05D010302 1.1e-15 86.7 97 46.4
PGSC0003DMG400046448 Solanum tuberosum HOM05D001685 ORTHO05D006653 4.4e-15 84.7 94 48.9
HanXRQChr12g0358111 Helianthus annuus HOM05D008202 ORTHO05D010302 5.7e-15 84.3 101 51.5
Manes.03G026600 Manihot esculenta HOM05D008202 ORTHO05D010302 5.7e-15 84.3 97 49.5
Manes.04G125801 Manihot esculenta HOM05D008202 ORTHO05D010302 7.4e-15 84.0 71 60.6
Manes.13G078801 Manihot esculenta HOM05D008202 ORTHO05D010302 7.4e-15 84.0 71 60.6
vmacro10849 Vaccinium macrocarpon HOM05D008202 ORTHO05D010302 9.7e-15 83.6 58 65.5
Lsat_1_v5_gn_8_98261 Lactuca sativa HOM05D008202 ORTHO05D010302 1.3e-14 83.2 97 48.5
GSVIVG01015295001 Vitis vinifera HOM05D008202 ORTHO05D010302 2.2e-14 82.4 78 55.1
Gohir.A06G067500 Gossypium hirsutum HOM05D008202 ORTHO05D010302 4.8e-14 81.3 102 52.0
Solyc04g058130.3 Solanum lycopersicum HOM05D008202 ORTHO05D010302 4.8e-14 81.3 94 46.8
Ciclev10027258m.g Citrus clementina HOM05D008202 ORTHO05D010302 6.3e-14 80.9 57 64.9
Actinidia17520 Actinidia chinensis HOM05D008202 ORTHO05D010302 1.1e-13 80.1 100 45.0
COL.COLO4_34733 Corchorus olitorius HOM05D008202 ORTHO05D010302 1.1e-13 80.1 57 66.7
Ah.14g083220 Amaranthus hybridus HOM05D008202 ORTHO05D010302 3.1e-13 78.6 100 46.0
CiPaw.04G157000 Carya illinoinensis HOM05D008202 ORTHO05D010302 3.1e-13 78.6 98 48.0
Ah.14g082540 Amaranthus hybridus HOM05D008202 ORTHO05D010302 4.1e-13 78.2 45 73.3
Gorai.010G077500 Gossypium raimondii HOM05D008202 ORTHO05D010302 4.1e-13 78.2 96 47.9
Sc18g0001520 Simmondsia chinensis HOM05D008202 ORTHO05D010302 5.3e-13 77.8 97 44.3
DCAR_028656 Daucus carota HOM05D008202 ORTHO05D010302 7.0e-13 77.4 91 44.0
EL10Ac8g18376 Beta vulgaris HOM05D008202 ORTHO05D010302 1.2e-12 76.6 45 73.3
CiPaw.04G155900 Carya illinoinensis HOM05D008202 ORTHO05D010302 1.2e-12 76.6 98 46.9
AUR62010887 Chenopodium quinoa HOM05D008202 ORTHO05D010302 3.5e-12 75.1 106 44.3
AUR62021399 Chenopodium quinoa HOM05D008202 ORTHO05D010302 4.5e-12 74.7 100 45.0
CDE08G1102 Ceratophyllum demersum HOM05D008202 ORTHO05D010302 7.7e-12 73.9 95 44.2
Nitab4.5_0002557g0010 Nicotiana tabacum HOM05D001685 ORTHO05D006653 5.0e-11 71.2 85 44.7
FvH4_1g06280 Fragaria vesca HOM05D008202 ORTHO05D010302 8.5e-11 70.5 95 42.1
FAN19G1093 Fragaria x ananassa HOM05D008202 ORTHO05D010302 8.5e-11 70.5 95 42.1
FAN23G0175 Fragaria x ananassa HOM05D008202 ORTHO05D010302 8.5e-11 70.5 98 42.9
Gohir.D06G066100 Gossypium hirsutum HOM05D008202 ORTHO05D010302 1.1e-10 70.1 98 48.0
MD15G1197100 Malus domestica HOM05D008202 ORTHO05D010302 1.1e-10 70.1 85 47.1
ClCG11G002070 Citrullus lanatus HOM05D008202 ORTHO05D010302 1.5e-10 69.7 42 69.0
FAN26G0167 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.9e-10 69.3 59 57.6
FAN26G3206 Fragaria x ananassa HOM05D008202 ORTHO05D010302 1.9e-10 69.3 59 57.6
Medtr6g088800 Medicago truncatula HOM05D008202 ORTHO05D010302 2.5e-10 68.9 98 42.9
RcHm_v2.0_Chr2g0091981 Rosa chinensis HOM05D008202 ORTHO05D010302 1.6e-09 66.2 42 69.0
unitig_52.g17095 Utricularia gibba HOM05D008202 ORTHO05D010302 1.6e-09 66.2 55 54.5
Atru.chr7.1471 Acer truncatum HOM05D008202 ORTHO05D010302 2.1e-09 65.9 94 42.6
CsaV3_2G001850 Cucumis sativus L. HOM05D008202 ORTHO05D010302 2.1e-09 65.9 42 57.1
Ciclev10027039m.g Citrus clementina HOM05D008202 ORTHO05D010302 4.7e-09 64.7 100 41.0
Nn8g39054 Nelumbo nucifera HOM05D008202 ORTHO05D010302 4.7e-09 64.7 93 43.0
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 8.0e-09 63.9 67 44.8
Psat1g048280 Pisum sativum HOM05D008202 ORTHO05D010302 1.8e-08 62.8 96 38.5
Lalb_Chr14g0371911 Lupinus albus HOM05D008202 ORTHO05D010302 3.0e-08 62.0 92 40.2
unitig_52.g17250 Utricularia gibba HOM05D008202 ORTHO05D010302 3.0e-08 62.0 55 50.9
ATR0705G156 Amborella trichopoda HOM05D008202 ORTHO05D010302 6.7e-08 60.8 42 61.9
Eucgr.C03726 Eucalyptus grandis HOM05D008202 ORTHO05D010302 3.3e-07 58.5 84 41.7
CAN.G1325.3 Capsicum annuum HOM05D001685 ORTHO05D006653 5.7e-07 57.8 93 39.8
PSO210G1322 Papaver somniferum HOM05D061259 ORTHO05D010302 1.3e-06 56.6 35 65.7
PSO210G2383 Papaver somniferum HOM05D061259 ORTHO05D010302 1.3e-06 56.6 35 65.7
HPP92_009087 Vanilla planifolia HOM05D008202 ORTHO05D010302 1.7e-06 56.2 93 35.5
Mapoly0004s0023 Marchantia polymorpha HOM05D039400 ORTHO05D034304 2.2e-06 55.8 78 39.7


User provided reference genes

Program Settings