Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 1.1e-118 429.9 209 100.0
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 1.2e-99 366.7 205 85.9
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 1.4e-95 353.2 205 82.9
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 1.7e-93 346.3 205 80.5
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 9.1e-92 340.5 205 78.5
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 1.6e-91 339.7 205 78.0
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 2.0e-91 339.3 202 78.7
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.7e-91 339.0 205 76.6
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 4.5e-91 338.2 205 77.1
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 5.9e-91 337.8 205 77.1
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 7.7e-91 337.4 205 76.6
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.7e-90 336.3 205 76.6
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 7.2e-89 330.9 205 76.6
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 4.7e-88 328.2 203 75.9
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 8.0e-88 327.4 205 77.1
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 1.4e-87 326.6 205 74.1
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 2.0e-86 322.8 203 75.9
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 7.5e-86 320.9 205 76.1
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 1.3e-85 320.1 200 76.0
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 8.3e-85 317.4 205 72.7
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 8.3e-85 317.4 203 73.9
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 1.4e-84 316.6 205 71.7
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 1.6e-83 313.2 205 71.2
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 2.7e-83 312.4 205 72.2
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 7.7e-83 310.8 205 71.2
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 1.0e-82 310.5 205 70.7
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 2.3e-82 309.3 205 69.3
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 3.8e-82 308.5 205 70.2
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 3.8e-82 308.5 205 71.2
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 8.6e-82 307.4 205 70.7
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 1.1e-81 307.0 205 68.8
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.1e-81 307.0 205 68.8
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 1.9e-81 306.2 205 71.2
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 3.3e-81 305.4 205 68.8
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 4.2e-81 305.1 205 70.7
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 5.5e-81 304.7 205 69.3
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 7.2e-81 304.3 203 69.0
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 7.2e-81 304.3 205 69.3
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 1.2e-80 303.5 202 70.3
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.1e-80 302.8 202 71.8
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 4.0e-79 298.5 205 70.7
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 6.8e-79 297.7 205 69.3
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 1.5e-78 296.6 196 71.4
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 1.5e-78 296.6 205 68.3
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 2.6e-78 295.8 205 67.8
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 3.4e-78 295.4 232 64.2
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 7.5e-78 294.3 202 67.8
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 1.7e-77 293.1 207 65.2
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 8.3e-77 290.8 205 67.3
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 9.2e-76 287.3 201 65.2
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 2.7e-75 285.8 205 64.4
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 7.8e-75 284.3 201 71.6
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 1.6e-72 276.6 204 64.7
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 4.7e-72 275.0 203 64.5
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 6.1e-72 274.6 186 72.6
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 8.0e-72 274.2 203 61.6
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 5.2e-71 271.6 205 67.8
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 8.9e-71 270.8 200 63.0
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.7e-69 266.5 166 76.5
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 2.9e-69 265.8 203 60.1
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.4e-68 263.5 166 72.9
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 3.5e-67 258.8 205 61.5
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 4.6e-67 258.5 205 61.0
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 3.0e-66 255.8 202 63.9
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 4.3e-65 251.9 198 60.6
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.6e-64 250.0 160 71.9
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 6.2e-64 248.1 202 61.9
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 1.1e-63 247.3 202 63.4
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 1.8e-63 246.5 202 62.4
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 2.3e-63 246.1 202 62.4
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 2.3e-63 246.1 202 62.9
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 5.2e-63 245.0 202 61.4
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 1.5e-62 243.4 202 61.4
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 2.0e-62 243.0 202 61.9
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 2.0e-62 243.0 202 60.9
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 3.4e-62 242.3 191 61.3
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 1.3e-61 240.4 202 60.9
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 6.4e-61 238.0 202 55.9
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.4e-61 238.0 205 59.0
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 1.4e-60 236.9 177 67.2
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 3.5e-59 232.3 137 79.6
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 7.3e-57 224.6 137 78.1
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 2.3e-55 219.5 245 49.8
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 2.4e-52 209.5 230 48.3
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 1.2e-51 207.2 157 65.0
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 1.3e-50 203.8 141 66.7
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 1.1e-49 200.7 178 57.3
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 9.5e-49 197.6 213 52.1
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 3.4e-46 189.1 201 50.7
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 5.8e-46 188.3 130 69.2
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 4.2e-44 182.2 205 48.8
CsaV3_UNG066530 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.2e-43 180.6 103 77.7
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 2.7e-43 179.5 103 76.7
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 2.7e-43 179.5 205 48.3
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 6.0e-43 178.3 205 46.8
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 6.2e-40 168.3 199 44.2
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 1.8e-39 166.8 138 58.7
Sed0024135 Sechium edule HOM05D006034 ORTHO05D007535 2.4e-39 166.4 103 72.8
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 1.2e-38 164.1 194 42.3
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 2.6e-38 162.9 196 48.0
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 4.2e-36 155.6 205 42.4
Phvul.004G171500 Phaseolus vulgaris HOM05D006034 ORTHO05D007535 7.1e-36 154.8 103 66.0
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 1.2e-35 154.1 139 58.3
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 2.3e-34 149.8 104 72.1
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 1.3e-32 144.1 151 53.0
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 4.8e-32 142.1 91 70.3
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 2.4e-31 139.8 91 70.3
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 6.9e-31 138.3 91 70.3
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 1.2e-30 137.5 91 68.1
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 1.3e-29 134.0 144 51.4
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 2.2e-29 133.3 138 49.3
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 8.4e-29 131.3 197 39.1
TWI34G0201 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.4e-28 130.6 73 79.5
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.4e-28 129.8 74 81.1
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 1.5e-25 120.6 154 42.9
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 1.1e-23 114.4 198 36.9
Peaxi162Scf00498g00128 Petunia axillaris HOM05D006034 ORTHO05D007535 1.0e-21 107.8 74 68.9
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 2.2e-21 106.7 97 54.6
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 1.4e-20 104.0 62 79.0
C01p09900 Brassica napus HOM05D006034 ORTHO05D007535 1.2e-19 100.9 80 62.5
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea HOM05D006034 ORTHO05D005279 3.5e-19 99.4 73 65.8
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 1.6e-16 90.5 68 66.2
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea HOM05D006034 ORTHO05D007535 2.8e-16 89.7 56 75.0
Haze_27155 Corylus avellana HOM05D003386 ORTHO05D007535 8.2e-16 88.2 170 33.5
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 9.0e-15 84.7 198 30.3
BcaC09g52218 Brassica carinata HOM05D006034 ORTHO05D007535 3.4e-14 82.8 79 54.4
CsaV3_UNG066540 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.4e-12 77.4 65 53.8
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 6.1e-11 72.0 55 61.8
CSS0015474 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 6.1e-11 72.0 89 43.8
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 3.3e-09 66.2 51 62.7
AT4G29540 Arabidopsis thaliana HOM05D006034 ORTHO05D007535 6.9e-07 58.5 74 43.2


User provided reference genes

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