Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.1e-287 991.1 498 100.0
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 2.5e-172 609.4 484 65.5
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 5.1e-165 585.1 504 62.5
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 9.3e-159 564.3 501 60.1
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 2.6e-153 546.2 507 60.0
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 9.9e-153 544.3 450 62.0
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 3.8e-152 542.3 506 60.3
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.9e-151 540.0 515 57.3
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 2.4e-151 539.7 513 57.5
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 3.2e-151 539.3 505 59.6
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 1.3e-149 533.9 511 57.3
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 5.6e-148 528.5 506 57.5
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 1.6e-147 526.9 508 57.5
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 1.6e-147 526.9 500 57.8
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 3.1e-146 522.7 495 57.8
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.0e-145 520.0 507 55.6
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 4.5e-145 518.8 510 54.5
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 1.3e-144 517.3 510 54.5
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 3.2e-143 512.7 505 57.2
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 4.2e-143 512.3 503 55.9
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 1.2e-142 510.8 509 56.4
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 2.3e-141 506.5 500 55.8
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 3.0e-141 506.1 512 55.1
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 3.9e-141 505.8 503 54.7
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 6.7e-141 505.0 508 55.3
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 4.3e-140 502.3 509 54.2
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 7.4e-140 501.5 501 54.7
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 2.1e-139 500.0 501 57.1
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.4e-138 496.5 487 55.2
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 3.1e-138 496.1 511 53.0
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 5.3e-138 495.4 512 54.1
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 1.0e-136 491.1 516 52.9
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.7e-136 490.3 487 54.6
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 4.9e-136 488.8 509 53.2
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 7.1e-135 485.0 511 51.5
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 4.6e-134 482.3 503 53.9
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 6.7e-133 478.4 511 52.3
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 4.8e-131 472.2 511 52.4
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.3e-128 464.2 427 56.4
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 1.4e-127 460.7 502 52.4
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 5.5e-127 458.8 508 50.8
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 6.7e-125 451.8 506 49.2
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.5e-124 450.7 509 50.3
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 9.7e-124 448.0 528 49.4
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 4.1e-122 442.6 437 56.8
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 5.9e-121 438.7 504 49.6
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 3.6e-118 429.5 507 48.9
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 6.1e-118 428.7 506 48.4
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 7.9e-118 428.3 523 49.3
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.0e-117 427.9 505 48.5
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 3.0e-117 426.4 507 48.1
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 1.1e-116 424.5 506 48.0
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 2.0e-116 423.7 509 47.5
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 1.7e-115 420.6 509 47.9
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 1.4e-114 417.5 509 47.5
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.8e-114 417.2 509 47.5
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 3.1e-114 416.4 509 47.2
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 7.7e-113 411.8 516 46.1
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 1.0e-112 411.4 503 46.9
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.7e-112 410.6 512 46.7
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 8.5e-112 408.3 413 55.0
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.4e-111 407.5 413 54.7
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.2e-111 406.0 434 51.8
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 3.7e-107 392.9 409 53.8
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 4.1e-106 389.4 418 51.4
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 2.6e-105 386.7 419 51.8
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 4.2e-103 379.4 501 45.1
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 9.4e-95 351.7 415 47.7
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 4.4e-92 342.8 514 41.6
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 2.4e-90 337.0 420 46.2
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.1e-90 336.7 300 58.7
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 4.4e-84 316.2 368 51.1
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 1.6e-78 297.7 546 37.9
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 5.4e-74 282.7 461 39.5
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.6e-73 281.2 238 60.1
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 4.6e-73 279.6 497 36.8
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 6.8e-69 265.8 498 35.9
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 5.4e-66 256.1 563 33.4
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.5e-39 168.3 159 57.2
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 6.2e-38 162.9 474 27.2
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.2e-27 127.9 118 55.9
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 6.7e-24 116.3 438 26.3
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.3e-19 102.1 446 27.8
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 3.8e-11 73.9 245 27.3
CBR_g17901 Chara braunii HOM05D007800 ORTHO05D009881 1.3e-06 58.9 279 22.9


User provided reference genes

Program Settings