Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 4.0e-85 318.2 171 100.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 5.2e-77 291.2 166 91.0
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 5.7e-76 287.7 171 88.3
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.8e-75 285.4 166 89.8
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 7.0e-74 280.8 166 88.6
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 1.2e-73 280.0 170 87.1
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 7.8e-73 277.3 170 87.1
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 2.3e-72 275.8 170 83.5
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.5e-71 273.1 170 82.4
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 4.3e-71 271.6 170 81.8
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.6e-71 271.2 168 82.7
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 7.3e-71 270.8 167 82.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 4.7e-70 268.1 166 82.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 6.1e-70 267.7 168 82.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.1e-70 267.7 168 81.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 2.3e-69 265.8 168 82.1
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.1e-69 265.4 170 82.4
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.0e-69 265.0 167 82.0
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 4.0e-69 265.0 168 79.8
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 5.2e-69 264.6 163 81.6
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 5.2e-69 264.6 170 80.0
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 5.2e-69 264.6 159 84.9
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 8.9e-69 263.8 170 81.8
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 8.9e-69 263.8 170 81.8
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.2e-68 263.5 169 79.9
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.5e-68 263.1 165 81.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 2.0e-68 262.7 169 81.1
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 2.0e-68 262.7 154 85.7
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.0e-68 262.7 170 78.8
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 2.6e-68 262.3 168 77.4
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.6e-68 262.3 170 81.8
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.4e-68 261.9 169 79.3
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 3.4e-68 261.9 171 79.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 5.8e-68 261.2 168 81.0
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 5.8e-68 261.2 158 84.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.8e-68 261.2 170 79.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.8e-68 261.2 170 79.4
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 7.5e-68 260.8 171 80.1
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 7.5e-68 260.8 171 78.9
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 7.5e-68 260.8 170 80.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 9.8e-68 260.4 162 81.5
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.7e-67 259.6 171 77.8
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.7e-67 259.6 171 77.8
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.2e-67 259.2 169 78.1
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.9e-67 258.8 170 78.2
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.9e-67 258.1 165 78.2
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 4.9e-67 258.1 160 82.5
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.9e-67 258.1 168 78.6
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 4.9e-67 258.1 168 78.6
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 6.4e-67 257.7 169 80.5
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.4e-67 257.7 167 80.2
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 6.4e-67 257.7 165 81.2
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 6.4e-67 257.7 151 88.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.3e-67 257.3 169 79.3
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 8.3e-67 257.3 168 79.2
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 8.3e-67 257.3 168 79.2
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 8.3e-67 257.3 166 81.3
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 8.3e-67 257.3 154 83.8
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 8.3e-67 257.3 166 80.7
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.1e-66 256.9 171 78.9
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-66 256.9 169 78.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.4e-66 256.5 169 75.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.9e-66 256.1 170 77.1
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.9e-66 256.1 169 75.7
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.9e-66 256.1 170 77.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.9e-66 256.1 161 78.3
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.4e-66 255.8 168 78.6
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.4e-66 255.8 168 78.6
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 3.2e-66 255.4 167 79.0
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 3.2e-66 255.4 169 75.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 3.2e-66 255.4 167 78.4
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-66 255.4 171 78.9
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-66 255.4 171 78.9
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.2e-66 255.4 171 78.9
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.1e-66 255.0 168 78.0
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.1e-66 255.0 173 76.9
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 7.0e-66 254.2 169 75.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 7.0e-66 254.2 169 78.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.0e-66 254.2 167 76.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.2e-65 253.4 169 76.9
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.2e-65 253.4 168 77.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.0e-65 252.7 157 79.6
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.0e-65 252.7 155 80.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.0e-65 252.7 167 77.2
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.0e-65 252.7 162 79.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 6.0e-65 251.1 168 76.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 7.8e-65 250.8 147 85.0
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.7e-64 249.6 169 77.5
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 3.9e-64 248.4 151 82.1
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.9e-64 248.4 153 83.0
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.1e-62 242.7 141 85.8
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 6.2e-62 241.1 167 73.7
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 8.0e-62 240.7 171 69.6
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.1e-61 240.4 153 77.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.4e-61 240.0 158 76.6
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.1e-61 238.8 153 78.4
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.0e-61 238.4 143 82.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 4.0e-61 238.4 153 78.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 4.0e-61 238.4 168 73.2
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 5.2e-61 238.0 153 78.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.2e-60 236.9 156 79.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.1e-58 230.3 169 71.0
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.4e-58 229.2 167 67.7
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 9.2e-58 227.3 147 80.3
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.6e-57 226.5 166 69.3
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.6e-57 224.9 158 72.8
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 5.1e-56 221.5 157 73.9
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 6.8e-53 211.1 134 80.6
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 2.0e-52 209.5 152 69.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 5.8e-52 208.0 131 78.6
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.7e-51 206.5 118 87.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.3e-51 204.1 120 86.7
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 3.2e-50 202.2 164 65.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 9.2e-50 200.7 120 83.3
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 4.6e-49 198.4 153 63.4
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 3.0e-48 195.7 154 64.9
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.6e-46 188.7 108 88.9
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 6.2e-46 188.0 107 86.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.6e-44 182.6 107 85.0
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 4.4e-44 181.8 152 59.2
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 4.4e-44 181.8 121 79.3
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 8.4e-43 177.6 131 65.6
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.0e-40 170.6 129 71.3
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.1e-33 146.4 91 79.1
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.9e-27 125.2 123 46.3
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 5.5e-18 95.1 106 55.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 7.1e-10 68.2 118 43.2


User provided reference genes

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