Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 6.4e-108 394.0 193 100.0
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.0e-73 280.4 194 73.7
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.4e-70 269.2 201 69.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 1.1e-67 260.4 194 68.6
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 3.9e-65 251.9 195 66.7
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 7.2e-59 231.1 160 70.6
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 2.7e-58 229.2 132 81.8
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 3.6e-58 228.8 140 78.6
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.8e-57 226.5 199 62.8
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.3e-57 226.1 198 62.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 5.2e-57 224.9 196 58.7
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 6.7e-57 224.6 205 60.0
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 8.8e-57 224.2 135 75.6
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.1e-56 223.8 138 77.5
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.1e-56 223.8 138 77.5
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 1.1e-56 223.8 196 60.7
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.6e-56 222.6 140 79.3
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 4.4e-56 221.9 166 66.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 4.4e-56 221.9 140 78.6
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 9.7e-56 220.7 178 64.6
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.8e-55 219.2 140 78.6
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.1e-54 217.2 129 79.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.8e-54 216.5 198 59.6
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 2.4e-54 216.1 187 61.0
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 3.1e-54 215.7 132 79.5
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 4.1e-54 215.3 133 76.7
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 5.3e-54 214.9 188 61.7
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.6e-53 212.6 126 79.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 3.5e-53 212.2 183 58.5
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 3.5e-53 212.2 195 59.5
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 4.5e-53 211.8 159 66.0
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 7.7e-53 211.1 195 58.5
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.3e-52 210.3 140 74.3
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 2.2e-52 209.5 135 74.1
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.9e-52 209.1 162 63.6
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.9e-52 209.1 197 58.9
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.8e-52 208.8 122 79.5
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.0e-52 208.4 146 67.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 5.0e-52 208.4 175 62.3
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 8.5e-52 207.6 163 66.3
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.5e-51 206.8 173 61.8
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.5e-51 206.8 147 70.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.5e-51 206.1 135 69.6
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 2.5e-51 206.1 156 67.3
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 9.4e-51 204.1 191 56.0
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 1.2e-50 203.8 139 70.5
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.1e-50 203.0 139 73.4
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 2.1e-50 203.0 137 72.3
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 8.0e-50 201.1 143 70.6
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 8.0e-50 201.1 114 82.5
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.4e-49 200.3 129 71.3
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.8e-49 199.9 114 82.5
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 4.0e-49 198.7 162 64.8
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 6.8e-49 198.0 142 66.2
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 8.8e-49 197.6 122 75.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.2e-48 197.2 170 59.4
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.0e-48 196.4 183 54.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 5.7e-48 194.9 144 66.0
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 5.7e-48 194.9 142 66.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 5.7e-48 194.9 197 52.3
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 2.2e-47 193.0 146 65.1
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 4.8e-47 191.8 140 67.9
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.8e-46 189.9 130 70.0
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.6e-45 186.8 143 65.7
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 2.0e-45 186.4 166 57.8
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 5.0e-44 181.8 195 52.3
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 6.5e-44 181.4 176 56.2
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.5e-43 179.5 125 69.6
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.5e-43 179.5 125 69.6
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.5e-43 179.5 200 52.0
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 2.5e-43 179.5 143 64.3
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 4.2e-43 178.7 126 69.0
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 5.5e-43 178.3 125 70.4
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 1.2e-42 177.2 126 68.3
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.2e-42 177.2 126 68.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.6e-42 176.8 126 68.3
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.1e-42 176.4 134 68.7
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 3.6e-42 175.6 133 66.2
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 3.6e-42 175.6 124 70.2
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.6e-42 175.6 120 70.8
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 4.7e-42 175.3 199 52.8
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 8.0e-42 174.5 200 53.0
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 4.4e-40 168.7 121 68.6
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.2e-39 166.4 113 71.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.8e-39 166.0 138 64.5
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.4e-38 163.7 200 46.5
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 4.1e-38 162.2 179 50.8
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 4.1e-38 162.2 179 50.8
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.0e-38 161.4 150 58.0
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 5.9e-37 158.3 132 61.4
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.0e-36 157.5 145 56.6
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 6.1e-34 148.3 173 45.1
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 2.6e-32 142.9 145 53.8
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 8.3e-31 137.9 123 53.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 5.4e-30 135.2 123 53.7
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 1.2e-29 134.0 118 58.5
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 5.6e-27 125.2 82 68.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.6e-26 123.6 86 68.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 2.1e-26 123.2 82 68.3
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.8e-25 118.2 85 69.4
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.0e-24 116.7 85 68.2
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.5e-21 105.9 80 63.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.0e-12 77.8 51 72.5
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 2.3e-09 66.6 52 61.5
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 6.8e-09 65.1 95 38.9
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 6.4e-07 58.5 79 48.1


User provided reference genes

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