Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19222 Avicennia marina HOM05D000236 ORTHO05D088067 2.5e-68 262.3 163 100.0
MSTRG.5803 Avicennia marina HOM05D000236 ORTHO05D000192 1.9e-28 129.8 177 49.7
SGA_v2.0_scaffold35G14104 Striga asiatica HOM05D000236 ORTHO05D000192 3.5e-14 82.4 159 43.4
MSTRG.26657 Avicennia marina HOM05D000236 ORTHO05D000192 1.0e-13 80.9 173 46.8
Migut.L01748 Erythranthe guttata HOM05D000236 ORTHO05D000192 1.1e-12 77.4 165 53.3
Oeu040551.1 Olea europaea HOM05D000236 ORTHO05D000192 2.1e-11 73.2 165 39.4
unitig_578.g16377 Utricularia gibba HOM05D000236 ORTHO05D000192 8.0e-11 71.2 165 39.4
Oeu023846.1 Olea europaea HOM05D000236 ORTHO05D000192 1.4e-10 70.5 172 39.5
MSTRG.10344 Avicennia marina HOM05D000236 ORTHO05D000192 2.3e-10 69.7 175 35.4
Dinv21269 Davidia involucrata HOM05D000236 ORTHO05D000192 2.3e-10 69.7 159 42.1
SalBow5G3980 Salvia bowleyana HOM05D000236 ORTHO05D000192 2.3e-10 69.7 171 43.9
SGA_v2.0_scaffold184G39909 Striga asiatica HOM05D000236 ORTHO05D000192 4.0e-10 68.9 158 55.1
SGA_v2.0_scaffold184G39917 Striga asiatica HOM05D000236 ORTHO05D000192 4.0e-10 68.9 158 55.1
Phvul.007G223900 Phaseolus vulgaris HOM05D000236 ORTHO05D000192 6.4e-08 61.6 65 55.4
Actinidia39874 Actinidia chinensis HOM05D000236 ORTHO05D000192 1.1e-07 60.8 159 39.6
Glyma.13G150600 Glycine max HOM05D000236 ORTHO05D000192 1.9e-07 60.1 55 61.8
SGA_v2.0_scaffold40G15420 Striga asiatica HOM05D000236 ORTHO05D000192 1.9e-07 60.1 160 37.5
unitig_578.g16027 Utricularia gibba HOM05D000236 ORTHO05D000192 1.9e-07 60.1 161 34.8
Thecc.05G079700 Theobroma cacao HOM05D000236 ORTHO05D000192 4.1e-07 58.9 80 48.8
GSVIVG01033765001 Vitis vinifera HOM05D000236 ORTHO05D000192 4.1e-07 58.9 66 54.5
CiPaw.10G004400 Carya illinoinensis HOM05D000236 ORTHO05D000192 1.2e-06 57.4 70 52.9
Cc06_g05090 Coffea canephora HOM05D000236 ORTHO05D000192 1.2e-06 57.4 166 38.6
Duzib128G0203 Durio zibethinus HOM05D000236 ORTHO05D000192 1.2e-06 57.4 81 49.4
Glyma.10G065500 Glycine max HOM05D000236 ORTHO05D000192 1.2e-06 57.4 55 61.8
Ah.08g211040 Amaranthus hybridus HOM05D000236 ORTHO05D000192 1.6e-06 57.0 81 50.6
Dinv19815 Davidia involucrata HOM05D000236 ORTHO05D000192 1.6e-06 57.0 158 36.1
Duzib093G1118 Durio zibethinus HOM05D000236 ORTHO05D000192 1.6e-06 57.0 80 48.8
VMungo0720G0700 Vigna mungo HOM05D000236 ORTHO05D000192 1.6e-06 57.0 65 52.3
COL.COLO4_29835 Corchorus olitorius HOM05D000236 ORTHO05D000192 2.1e-06 56.6 72 48.6
Duzib106G0801 Durio zibethinus HOM05D000236 ORTHO05D000192 2.1e-06 56.6 81 50.6
EL10Ac7g17014 Beta vulgaris HOM05D000236 ORTHO05D000192 2.7e-06 56.2 81 48.1
Cfa016519 Carpinus fangiana HOM05D000236 ORTHO05D000192 3.5e-06 55.8 73 54.8
TPR.G5691 Trifolium pratense HOM05D000236 ORTHO05D000192 3.5e-06 55.8 67 52.2
Nn6g35078 Nelumbo nucifera HOM05D000236 ORTHO05D000192 7.8e-06 54.7 159 37.1


User provided reference genes

Program Settings