Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 2.7e-146 521.9 259 100.0
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.6e-99 364.8 260 73.8
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.2e-96 357.1 263 71.5
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 2.6e-96 355.9 266 71.4
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 4.4e-96 355.1 264 72.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 4.4e-96 355.1 278 70.1
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 2.9e-95 352.4 274 71.9
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 2.4e-94 349.4 266 69.9
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 4.6e-93 345.1 270 69.3
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 6.0e-93 344.7 260 70.0
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.0e-92 344.0 229 77.3
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 1.3e-92 343.6 244 72.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 2.3e-92 342.8 271 69.0
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 6.6e-92 341.3 263 70.7
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 6.6e-92 341.3 262 70.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.9e-91 339.7 230 77.0
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 7.3e-91 337.8 267 68.2
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.6e-90 336.7 250 71.6
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 2.1e-90 336.3 247 71.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.8e-90 335.9 229 76.0
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.8e-90 335.9 267 68.2
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 6.2e-90 334.7 260 68.8
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 6.2e-90 334.7 263 70.3
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 8.1e-90 334.3 181 89.5
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.8e-89 333.2 255 68.2
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.8e-89 333.2 180 88.9
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 6.9e-89 331.3 216 75.5
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 6.9e-89 331.3 190 85.8
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 9.0e-89 330.9 269 69.1
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 1.2e-88 330.5 180 90.0
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.2e-88 330.5 264 68.2
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 2.0e-88 329.7 261 67.0
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 2.6e-88 329.3 179 89.4
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.6e-88 329.3 265 70.6
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 5.8e-88 328.2 184 87.0
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 7.6e-88 327.8 266 66.9
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 7.6e-88 327.8 266 66.9
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.3e-87 327.0 238 71.0
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.9e-87 325.9 227 73.1
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 8.4e-87 324.3 259 66.4
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 7.1e-86 321.2 199 79.4
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 9.3e-86 320.9 260 65.0
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.2e-85 320.5 224 72.3
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.1e-85 319.7 201 80.1
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.1e-85 319.7 181 86.2
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 3.5e-85 318.9 259 64.9
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 3.5e-85 318.9 268 64.6
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 7.8e-85 317.8 264 66.7
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.0e-84 317.4 182 84.1
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.3e-84 317.0 226 72.1
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.3e-84 317.0 246 66.3
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.7e-84 316.6 277 62.8
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.7e-84 316.6 262 65.6
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.3e-84 316.2 264 66.7
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 3.9e-84 315.5 264 64.4
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 5.1e-84 315.1 229 69.9
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.1e-83 313.9 261 66.7
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 2.5e-83 312.8 211 74.4
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 5.6e-83 311.6 254 66.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 1.6e-82 310.1 221 72.9
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 1.6e-82 310.1 214 72.4
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 3.6e-82 308.9 179 84.4
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 3.6e-82 308.9 198 75.8
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 1.1e-81 307.4 242 66.1
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 5.3e-81 305.1 260 65.8
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 5.3e-81 305.1 226 68.6
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 1.2e-80 303.9 216 72.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 1.5e-80 303.5 251 65.7
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 1.7e-79 300.1 229 69.9
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.9e-79 299.3 177 81.4
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.1e-78 297.4 179 81.6
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 1.4e-78 297.0 276 60.9
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 4.2e-78 295.4 178 79.8
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.1e-77 293.1 199 74.9
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.0e-76 290.8 194 75.3
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.8e-76 290.0 190 76.3
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 5.1e-76 288.5 243 64.2
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 7.4e-75 284.6 266 62.0
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.4e-73 280.4 203 70.9
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 3.1e-73 279.3 213 64.8
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 3.1e-73 279.3 265 60.8
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.8e-71 272.3 236 65.3
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 1.6e-69 266.9 278 54.3
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 3.9e-68 262.3 180 70.0
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 1.9e-67 260.0 177 70.6
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 9.6e-67 257.7 235 59.6
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.7e-66 255.8 259 55.2
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 2.5e-62 243.0 209 62.7
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 3.5e-61 239.2 185 68.1
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.9e-59 233.4 123 92.7
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 3.7e-58 229.2 205 63.4
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.0e-55 221.1 121 88.4
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 3.8e-47 192.6 173 62.4
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.0e-47 192.2 151 63.6
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.5e-43 180.6 182 52.2
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 6.3e-42 175.3 94 86.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.2e-34 150.2 129 62.8
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 5.0e-31 139.0 75 88.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 4.4e-27 125.9 65 89.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.0e-20 103.2 58 86.2
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.5e-11 74.3 105 47.6


User provided reference genes

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