Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 1.8e-64 249.2 133 100.0
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 2.2e-43 179.1 133 72.2
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.1e-42 176.8 133 69.2
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 1.7e-38 162.9 138 68.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 8.2e-38 160.6 140 62.9
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.0e-36 156.0 122 68.0
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 4.5e-36 154.8 125 64.8
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.7e-36 154.1 128 64.8
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 7.7e-36 154.1 128 61.7
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.7e-35 152.9 128 63.3
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 8.5e-35 150.6 122 65.6
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 8.5e-35 150.6 128 61.7
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.5e-34 149.1 122 64.8
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.2e-34 148.7 125 59.2
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 7.2e-34 147.5 128 60.2
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.6e-33 146.4 128 59.4
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 3.6e-33 145.2 123 58.5
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 6.1e-33 144.4 128 58.6
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 1.8e-32 142.9 132 56.8
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 4.0e-32 141.7 123 58.5
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 8.8e-32 140.6 122 58.2
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.2e-31 140.2 127 55.9
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.0e-31 139.4 130 53.8
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 2.6e-31 139.0 114 60.5
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.4e-31 138.7 125 58.4
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 9.7e-31 137.1 127 54.3
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.3e-30 136.7 125 56.0
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.7e-30 136.3 129 54.3
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.7e-30 136.3 129 55.8
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 1.7e-30 136.3 129 54.3
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 2.2e-30 136.0 129 55.8
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 2.2e-30 136.0 132 53.0
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 2.8e-30 135.6 127 56.7
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 4.8e-30 134.8 129 55.0
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 4.8e-30 134.8 122 59.8
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 6.3e-30 134.4 129 53.5
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 8.3e-30 134.0 127 55.1
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-29 133.7 121 58.7
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.1e-29 133.7 124 57.3
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 1.4e-29 133.3 126 54.0
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.8e-29 132.9 124 52.4
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 2.4e-29 132.5 127 55.1
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 3.1e-29 132.1 125 54.4
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 3.1e-29 132.1 126 57.1
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.1e-29 131.7 122 55.7
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.1e-29 131.7 129 52.7
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 5.3e-29 131.3 129 57.4
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 5.3e-29 131.3 127 56.7
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 7.0e-29 131.0 132 53.8
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 9.1e-29 130.6 125 56.8
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 1.6e-28 129.8 128 53.1
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.6e-28 129.8 122 54.9
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 127 57.5
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 124 51.6
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 124 51.6
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 2.0e-28 129.4 129 53.5
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 3.5e-28 128.6 122 54.1
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 3.5e-28 128.6 122 52.5
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.5e-28 128.6 157 49.0
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 4.5e-28 128.3 129 55.0
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 4.5e-28 128.3 129 55.0
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 5.9e-28 127.9 122 55.7
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 7.7e-28 127.5 132 49.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 7.7e-28 127.5 136 50.7
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 1.0e-27 127.1 117 56.4
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 1.0e-27 127.1 122 58.2
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.0e-27 127.1 121 57.0
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 1.3e-27 126.7 129 54.3
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.3e-27 126.7 122 55.7
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.7e-27 126.3 123 52.8
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.7e-27 126.3 128 53.9
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.7e-27 126.3 128 53.9
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.7e-27 126.3 128 53.9
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 1.7e-27 126.3 122 54.9
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 2.2e-27 125.9 151 49.0
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 2.2e-27 125.9 129 53.5
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 2.9e-27 125.6 129 55.8
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 2.9e-27 125.6 129 54.3
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 2.9e-27 125.6 122 55.7
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 6.5e-27 124.4 129 53.5
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 1.1e-26 123.6 136 52.2
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 1.1e-26 123.6 122 53.3
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.9e-26 122.9 129 53.5
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.9e-26 122.9 129 52.7
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.5e-26 122.5 139 51.8
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 3.2e-26 122.1 130 53.8
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 3.2e-26 122.1 129 52.7
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 1.2e-25 120.2 139 48.9
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 6.1e-25 117.9 131 49.6
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.0e-24 117.1 121 54.5
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.8e-24 116.3 122 48.4
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 1.8e-24 116.3 126 48.4
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 3.0e-24 115.5 122 47.5
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 4.4e-23 111.7 109 56.0
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 5.7e-23 111.3 81 67.9
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 5.7e-23 111.3 127 48.8
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 1.3e-22 110.2 124 45.2
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-21 106.7 104 55.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 5.4e-21 104.8 102 51.0
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.2e-20 103.6 155 42.6
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.0e-20 102.8 81 61.7
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 2.0e-20 102.8 75 64.0
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 1.3e-19 100.1 78 61.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.1e-18 97.1 75 61.3
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 3.4e-15 85.5 123 44.7
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 2.8e-14 82.4 123 43.1
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.7e-14 82.0 105 44.8
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 6.3e-14 81.3 100 43.0
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.4e-13 79.3 84 53.6
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 2.7e-12 75.9 127 39.4
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.3e-11 73.6 96 47.9
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.3e-11 73.6 96 47.9
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 8.6e-11 70.9 93 47.3
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.5e-10 70.1 93 47.3
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 7.3e-10 67.8 90 47.8
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 9.5e-10 67.4 93 46.2
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 9.5e-10 67.4 64 56.2
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.8e-09 65.9 96 35.4
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 6.8e-08 61.2 65 53.8
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 1.5e-07 60.1 44 70.5
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 2.6e-07 59.3 53 58.5


User provided reference genes

Program Settings