Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 8.5e-263 909.8 474 100.0
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 8.7e-207 723.8 490 77.3
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 2.5e-206 722.2 550 71.5
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 2.0e-203 712.6 471 78.8
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 7.6e-203 710.7 472 78.8
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 7.6e-203 710.7 472 78.8
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 2.2e-202 709.1 472 78.8
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 2.7e-200 702.2 438 82.4
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 2.7e-200 702.2 438 83.3
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 6.7e-199 697.6 471 77.3
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 1.9e-198 696.0 442 82.8
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 2.5e-198 695.7 466 78.1
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 9.6e-198 693.7 471 77.5
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 2.8e-197 692.2 466 75.8
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 4.5e-195 684.9 475 76.0
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 2.9e-194 682.2 471 74.7
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 3.8e-194 681.8 472 74.8
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 4.9e-194 681.4 471 76.4
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 1.4e-193 679.9 471 75.2
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 1.9e-193 679.5 471 76.6
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 5.5e-193 677.9 458 76.6
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 2.7e-192 675.6 483 74.3
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 3.5e-192 675.2 471 75.8
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 4.6e-192 674.9 475 75.8
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 7.9e-192 674.1 471 74.3
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.8e-191 672.9 471 76.0
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 6.7e-191 671.0 469 75.5
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.1e-190 670.2 471 75.8
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.5e-190 669.8 469 75.5
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 1.9e-190 669.5 468 75.0
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 2.5e-190 669.1 469 74.6
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 4.3e-190 668.3 478 73.2
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 5.7e-190 667.9 457 77.2
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 7.4e-190 667.5 449 77.5
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 2.1e-189 666.0 468 75.4
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.8e-189 665.6 476 73.7
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 4.8e-189 664.8 446 76.5
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 4.8e-189 664.8 474 74.3
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 8.2e-189 664.1 469 74.6
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.1e-188 663.7 449 76.8
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 1.4e-188 663.3 427 79.9
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 1.4e-188 663.3 468 74.8
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.8e-188 662.9 468 74.8
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 4.1e-188 661.8 469 74.0
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 4.1e-188 661.8 466 74.5
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 5.3e-188 661.4 471 73.7
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 5.3e-188 661.4 441 77.8
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 1.2e-187 660.2 472 74.2
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 1.2e-187 660.2 468 73.1
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 3.4e-187 658.7 425 80.2
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 2.2e-186 656.0 465 72.3
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 5.0e-186 654.8 425 79.5
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 1.1e-185 653.7 486 71.2
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 1.9e-185 652.9 428 78.0
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 2.5e-185 652.5 441 77.1
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 2.5e-185 652.5 448 75.2
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 2.5e-185 652.5 468 74.6
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 3.2e-185 652.1 466 73.8
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 4.2e-185 651.7 440 76.6
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 5.5e-185 651.4 502 71.9
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 7.2e-185 651.0 502 68.7
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 2.7e-184 649.0 474 70.7
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 1.0e-183 647.1 449 75.3
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 1.0e-183 647.1 468 72.2
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 1.3e-183 646.7 453 73.7
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 1.3e-183 646.7 467 73.7
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 2.3e-183 646.0 469 72.3
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 6.7e-183 644.4 409 81.9
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 1.5e-182 643.3 471 70.3
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 1.9e-182 642.9 466 72.5
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 2.8e-181 639.0 457 74.0
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 3.7e-181 638.6 454 73.8
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 6.3e-181 637.9 439 75.2
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.1e-180 637.1 473 71.9
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 1.1e-180 637.1 474 72.4
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 1.4e-180 636.7 438 75.1
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 1.4e-180 636.7 454 73.8
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 1.8e-180 636.3 438 74.9
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 3.1e-180 635.6 450 73.8
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 4.1e-180 635.2 454 73.3
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 1.2e-179 633.6 438 74.7
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 2.0e-179 632.9 441 74.8
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 2.6e-179 632.5 439 74.9
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 3.4e-179 632.1 438 74.7
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 4.5e-179 631.7 474 70.7
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 5.9e-179 631.3 489 69.9
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 1.3e-178 630.2 474 71.1
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 1.7e-178 629.8 473 69.6
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 2.5e-177 625.9 438 73.7
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 5.5e-177 624.8 465 70.5
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 7.9e-176 620.9 464 70.7
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 9.7e-174 614.0 452 71.7
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 4.8e-173 611.7 406 78.1
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.4e-172 610.1 399 79.7
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 3.2e-169 599.0 424 71.9
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 5.5e-169 598.2 422 71.8
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 1.6e-168 596.7 414 75.6
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 8.2e-165 584.3 424 70.8
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 4.5e-163 578.6 429 72.5
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 1.4e-159 567.0 409 74.3
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 1.8e-159 566.6 423 69.0
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 2.0e-158 563.1 417 71.9
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 2.0e-158 563.1 420 72.4
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 3.7e-157 558.9 385 73.0
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 6.1e-152 541.6 393 74.3
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 4.7e-144 515.4 482 63.9
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 1.3e-141 507.3 346 79.8
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 4.0e-135 485.7 434 59.0
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 2.3e-130 469.9 360 66.7
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 1.2e-128 464.2 437 62.2
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 8.3e-125 451.4 329 69.6
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 5.6e-121 438.7 437 55.6
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 1.2e-118 431.0 434 55.1
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 3.2e-116 422.9 281 79.7
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.5e-105 387.5 251 81.7
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 1.4e-100 370.9 388 55.7
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 3.4e-86 323.2 241 72.6
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 3.9e-82 309.7 202 79.2
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 3.3e-81 306.6 195 79.5
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 3.3e-81 306.6 236 70.8
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.9e-73 280.8 204 71.6
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 1.6e-67 261.2 218 61.9
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 5.0e-61 239.6 182 74.2
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 2.5e-60 237.3 147 78.2
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 4.2e-52 209.9 442 35.7
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 2.6e-49 200.7 124 79.8
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 2.7e-38 164.1 140 65.0
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 4.5e-38 163.3 137 65.7
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 2.2e-32 144.4 102 72.5
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 6.3e-32 142.9 260 37.7
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 5.4e-31 139.8 158 53.2
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 2.7e-30 137.5 132 61.4
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 3.8e-29 133.7 260 35.8
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 6.1e-27 126.3 101 67.3
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 1.0e-26 125.6 124 57.3
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 1.2e-22 112.1 110 55.5
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 4.7e-19 100.1 117 50.4
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 4.0e-18 97.1 87 58.6
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 2.7e-14 84.3 68 64.7
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 2.7e-14 84.3 68 64.7
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 7.8e-14 82.8 46 78.3
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 7.8e-14 82.8 46 78.3
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 6.6e-13 79.7 78 56.4
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 7.3e-12 76.3 61 55.7
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 3.6e-11 73.9 64 62.5
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 3.6e-11 73.9 80 53.8
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 4.7e-11 73.6 90 53.3
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 6.2e-11 73.2 64 62.5
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 8.0e-11 72.8 131 40.5
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 1.1e-10 72.4 64 60.9
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 1.1e-10 72.4 166 34.3
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 1.4e-10 72.0 63 61.9
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 1.4e-10 72.0 64 60.9
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 2.3e-10 71.2 64 59.4
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 1.5e-09 68.6 75 52.0
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 2.6e-09 67.8 176 31.8
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 2.2e-08 64.7 66 57.6
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 3.7e-08 63.9 46 60.9
CARHR249580 Cardamine hirsuta HOM05D004269 ORTHO05D021565 4.9e-08 63.5 56 62.5
AUR62005065 Chenopodium quinoa HOM05D018411 ORTHO05D021565 1.4e-07 62.0 62 56.5
CAN.G1327.6 Capsicum annuum HOM05D004269 ORTHO05D007861 4.1e-07 60.5 48 66.7
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 6.0e-06 56.6 43 67.4
BcaC07g37638 Brassica carinata HOM05D004269 ORTHO05D016737 7.8e-06 56.2 39 71.8


User provided reference genes

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