Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.4e-176 622.9 317 100.0
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 3.1e-115 419.1 296 73.0
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 9.9e-106 387.5 292 69.2
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 2.8e-92 342.8 278 68.3
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.1e-91 339.3 315 61.3
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 6.9e-91 338.2 308 62.0
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.3e-89 334.0 310 61.3
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.9e-89 332.8 303 60.1
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 8.4e-89 331.3 297 62.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 9.3e-88 327.8 302 59.9
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.1e-85 320.9 302 59.9
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.1e-85 320.9 300 57.0
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.5e-85 319.7 301 61.1
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 4.3e-85 318.9 302 59.9
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.6e-84 317.0 304 59.9
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.5e-82 310.5 293 57.7
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.4e-82 309.3 302 57.3
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.3e-81 307.4 297 57.2
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.7e-81 307.0 310 54.5
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 3.8e-81 305.8 304 58.2
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 6.4e-81 305.1 314 55.4
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 6.4e-81 305.1 311 57.2
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 6.4e-81 305.1 311 57.2
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 2.4e-80 303.1 308 57.1
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 3.2e-80 302.8 311 56.9
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 3.2e-80 302.8 305 57.0
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 4.2e-80 302.4 304 54.9
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 7.1e-80 301.6 297 58.2
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 7.1e-80 301.6 298 57.0
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.2e-79 300.8 309 57.6
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.0e-78 297.7 301 55.5
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 1.3e-78 297.4 300 58.0
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 3.0e-78 296.2 293 57.7
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 3.9e-78 295.8 296 54.7
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 6.7e-78 295.0 300 55.7
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 6.7e-78 295.0 291 57.4
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.5e-77 293.9 293 55.6
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.5e-77 293.1 303 57.1
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 3.7e-76 289.3 289 56.4
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 3.7e-76 289.3 334 50.9
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 6.2e-76 288.5 292 56.5
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.8e-75 287.0 300 55.7
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.8e-75 287.0 298 55.4
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 2.4e-75 286.6 330 51.5
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.3e-75 285.4 309 56.0
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.9e-75 285.0 300 55.7
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 9.0e-75 284.6 309 54.4
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 9.0e-75 284.6 281 56.9
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.0e-74 283.5 300 55.3
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 4.5e-74 282.3 305 55.7
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.5e-74 282.3 294 56.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.5e-74 282.3 294 56.1
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 5.8e-74 282.0 308 54.2
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 7.6e-74 281.6 303 53.1
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.0e-73 281.2 313 51.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 6.5e-73 278.5 330 50.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.4e-72 277.3 312 51.9
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 2.5e-72 276.6 296 54.1
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 3.2e-72 276.2 298 54.0
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 2.7e-71 273.1 306 53.9
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 3.5e-71 272.7 295 50.8
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.6e-71 272.3 296 53.0
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 4.6e-71 272.3 298 52.3
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 6.0e-71 271.9 293 52.9
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 7.9e-71 271.6 314 51.9
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.3e-70 270.8 247 61.9
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 2.3e-70 270.0 295 52.2
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 3.0e-70 269.6 278 54.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 6.7e-70 268.5 314 51.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 8.7e-70 268.1 283 54.8
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.1e-69 267.7 301 52.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.9e-69 266.9 293 53.2
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.9e-69 266.9 280 55.7
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.3e-69 265.8 294 52.4
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 5.7e-69 265.4 288 52.4
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.6e-68 263.8 299 50.5
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 1.1e-67 261.2 277 53.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.4e-67 260.0 279 55.2
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 4.1e-67 259.2 272 55.9
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.5e-65 251.5 352 44.6
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 5.5e-64 248.8 335 44.5
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.0e-62 244.6 157 73.2
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.0e-62 244.6 326 49.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 3.0e-62 243.0 299 48.5
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.9e-62 242.7 354 46.3
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 5.7e-61 238.8 272 50.7
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 7.4e-61 238.4 133 84.2
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 7.9e-55 218.4 281 48.0
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 2.0e-53 213.8 289 46.4
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.1e-51 208.0 109 83.5
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 2.6e-50 203.4 109 84.4
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.5e-48 196.8 300 45.7
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.7e-47 193.4 109 78.9
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 2.3e-46 190.3 249 50.2
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.3e-45 186.4 120 70.0
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 8.2e-44 181.8 142 62.7
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 8.2e-44 181.8 98 87.8
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 8.2e-44 181.8 138 66.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.2e-42 177.9 126 66.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 6.5e-41 172.2 94 80.9
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 6.1e-39 165.6 211 50.7
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.5e-37 161.0 124 59.7
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 3.3e-37 159.8 124 65.3
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 2.8e-36 156.8 98 76.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 4.1e-35 152.9 133 56.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 2.1e-31 140.6 218 42.7
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 6.5e-25 119.0 203 41.9
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.8e-23 113.6 191 44.5
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 9.2e-19 98.6 199 44.7
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.2e-18 98.2 205 37.1
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.8e-14 84.3 82 57.3
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.6e-13 80.5 195 37.9
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 5.7e-13 79.3 41 85.4
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 9.8e-13 78.6 99 44.4
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 9.8e-13 78.6 99 44.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-12 78.2 99 44.4
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 2.2e-12 77.4 99 44.4
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.0e-09 68.6 44 68.2
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.7e-09 67.8 195 33.8
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.5e-08 64.7 193 34.7
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 9.5e-08 62.0 107 42.1


User provided reference genes

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