Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 5.9e-97 357.5 170 100.0
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 4.5e-73 278.1 170 75.3
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 4.5e-73 278.1 164 77.4
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 5.9e-73 277.7 170 75.3
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 7.7e-73 277.3 170 75.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 2.2e-72 275.8 170 75.9
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 2.2e-72 275.8 165 77.0
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 2.9e-72 275.4 170 77.1
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 3.8e-72 275.0 165 77.0
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 5.0e-72 274.6 170 76.5
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.1e-71 273.5 164 76.2
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.5e-71 273.1 170 72.9
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.5e-71 272.3 166 76.5
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-71 272.3 165 75.2
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.2e-71 271.9 170 72.4
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 4.2e-71 271.6 170 76.5
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 5.5e-71 271.2 165 76.4
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 7.2e-71 270.8 170 71.8
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 7.2e-71 270.8 165 75.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 7.2e-71 270.8 165 75.8
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.7e-70 268.9 165 74.5
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 3.6e-70 268.5 167 71.3
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 4.7e-70 268.1 167 73.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.4e-69 266.5 167 72.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.8e-69 266.2 163 74.8
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 8.8e-69 263.8 170 70.0
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.2e-68 263.5 173 70.5
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.4e-68 261.9 165 73.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.4e-68 261.9 170 70.0
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.4e-68 261.9 167 71.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 5.7e-68 261.2 170 70.0
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 5.7e-68 261.2 167 69.5
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 7.5e-68 260.8 167 70.7
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 9.8e-68 260.4 165 71.5
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.3e-67 260.0 162 71.0
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.3e-67 260.0 165 73.3
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.3e-67 260.0 170 69.4
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 73.0
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.7e-67 259.6 170 70.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.8e-67 258.8 170 69.4
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.7e-67 258.5 170 68.8
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 6.3e-67 257.7 160 72.5
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 6.3e-67 257.7 167 71.3
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 1.1e-66 256.9 171 71.9
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.4e-66 256.5 165 72.7
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.4e-66 255.8 166 73.5
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 2.4e-66 255.8 168 69.0
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 4.1e-66 255.0 170 70.0
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.2e-65 253.4 171 69.0
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.2e-65 253.4 165 71.5
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.2e-65 253.4 168 68.5
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 3.5e-65 251.9 168 70.8
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 3.5e-65 251.9 165 69.1
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 5.9e-65 251.1 169 63.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.3e-64 250.0 165 69.1
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.7e-64 249.6 166 68.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.0e-64 248.1 169 62.7
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 5.0e-64 248.1 161 72.7
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 1.5e-63 246.5 166 69.3
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.5e-63 246.5 166 69.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 7.2e-63 244.2 171 67.3
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.2e-62 243.4 166 67.5
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.6e-62 243.0 166 66.9
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.4e-61 240.0 170 64.1
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 6.8e-61 237.7 162 64.8
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 8.8e-61 237.3 165 65.5
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 8.8e-61 237.3 165 65.5
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.3e-59 233.4 164 62.2
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.7e-59 233.0 166 63.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.2e-59 232.6 153 69.9
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.4e-58 229.9 159 65.4
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.4e-58 229.2 165 64.2
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.1e-58 228.8 171 67.3
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 4.1e-58 228.4 170 64.1
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 5.4e-58 228.0 160 64.4
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 7.0e-58 227.6 160 63.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 9.2e-58 227.3 145 73.8
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.6e-57 226.5 165 63.6
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 2.0e-57 226.1 158 63.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.0e-57 226.1 170 63.5
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 2.7e-57 225.7 159 64.2
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 2.7e-57 225.7 165 63.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.5e-57 225.3 160 63.1
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.0e-56 223.8 160 63.8
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.5e-55 219.2 169 62.7
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.8e-53 211.1 141 69.5
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 2.6e-52 209.1 166 62.0
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 3.2e-50 202.2 139 64.7
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 9.2e-50 200.7 139 64.7
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.7e-49 199.1 129 74.4
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 3.5e-49 198.7 167 58.7
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 4.6e-49 198.4 158 59.5
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.7e-48 196.4 140 66.4
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.9e-47 193.0 167 58.1
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 2.5e-47 192.6 160 57.5
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 2.8e-46 189.1 129 65.1
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 8.0e-46 187.6 167 55.1
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.0e-45 187.2 161 52.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.3e-45 186.0 169 56.8
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.0e-45 185.3 164 54.9
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.9e-43 179.1 164 53.0
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.9e-42 176.4 175 53.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.0e-41 172.9 118 62.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.0e-41 172.9 165 50.9
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.7e-41 172.6 171 50.9
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.3e-40 170.2 165 46.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 8.6e-40 167.5 174 51.7
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 6.2e-38 161.4 156 51.9
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 2.6e-36 156.0 166 43.4
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.1e-33 146.4 143 52.4
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.3e-31 139.0 150 48.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 6.8e-29 131.3 166 42.2
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 6.8e-29 131.3 111 60.4
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 4.4e-28 128.6 85 69.4
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 6.4e-27 124.8 130 52.3
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 4.6e-25 118.6 89 65.2
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 8.4e-19 97.8 51 80.4
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 6.6e-16 88.2 152 35.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 5.8e-12 75.1 119 38.7
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.2e-11 73.2 44 70.5


User provided reference genes

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