Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 2.4e-170 602.1 304 100.0
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 7.3e-98 361.3 301 66.8
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 1.2e-95 354.0 256 72.7
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.6e-92 343.6 286 66.4
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 6.2e-89 331.6 303 59.4
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.3e-88 329.7 207 76.3
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 2.3e-88 329.7 289 62.6
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 4.0e-88 328.9 201 80.6
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 8.9e-88 327.8 245 68.2
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.2e-87 327.4 219 73.5
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.5e-87 327.0 203 79.3
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 2.0e-87 326.6 266 64.7
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 2.6e-87 326.2 301 59.5
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 3.4e-87 325.9 299 60.2
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 5.8e-87 325.1 302 58.9
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 2.2e-86 323.2 293 62.8
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 2.2e-86 323.2 201 79.1
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 2.9e-86 322.8 213 73.2
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 3.7e-86 322.4 288 62.2
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.9e-86 322.0 208 76.4
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 4.9e-86 322.0 295 61.7
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 8.3e-86 321.2 303 61.4
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.1e-85 320.9 202 77.2
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 4.1e-85 318.9 294 60.2
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 4.1e-85 318.9 295 61.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 5.4e-85 318.5 294 61.9
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 5.4e-85 318.5 271 62.4
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 9.2e-85 317.8 294 60.2
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.6e-84 317.0 206 73.3
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.6e-84 317.0 280 62.5
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 2.1e-84 316.6 200 77.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 2.1e-84 316.6 208 72.6
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.1e-84 316.6 202 76.2
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 2.1e-84 316.6 276 61.2
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.1e-84 316.6 289 60.6
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.1e-84 316.6 285 61.1
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.5e-84 315.8 294 59.9
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.5e-84 315.8 291 60.8
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.6e-84 315.5 268 63.8
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 6.0e-84 315.1 203 74.4
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 1.0e-83 314.3 202 74.8
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.7e-83 313.5 300 60.0
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.3e-83 313.2 203 73.9
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.3e-83 313.2 203 73.9
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 5.1e-83 312.0 272 61.4
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.1e-82 310.8 199 75.4
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.9e-82 310.1 214 70.6
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 3.3e-82 309.3 208 72.1
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 2.8e-81 306.2 288 59.0
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.8e-81 306.2 303 58.1
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.6e-81 305.8 287 60.3
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 3.6e-81 305.8 222 67.6
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 4.7e-81 305.4 284 60.6
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 6.2e-81 305.1 284 59.5
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 8.1e-81 304.7 284 57.7
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.1e-80 304.3 286 61.2
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 1.4e-80 303.9 219 70.3
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 3.1e-80 302.8 292 58.9
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 3.1e-80 302.8 293 58.4
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 4.0e-80 302.4 284 59.2
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 4.0e-80 302.4 284 59.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 8.9e-80 301.2 297 55.6
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 1.2e-79 300.8 199 72.9
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 1.5e-79 300.4 277 59.2
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 3.4e-79 299.3 289 58.5
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 5.8e-79 298.5 199 72.4
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 7.6e-79 298.1 277 58.1
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.7e-78 297.0 268 57.5
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 2.9e-78 296.2 261 59.4
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 2.4e-77 293.1 215 67.0
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 5.4e-77 292.0 276 56.9
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 7.8e-76 288.1 208 69.2
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.7e-75 287.0 290 56.2
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 3.0e-75 286.2 202 68.3
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.0e-75 286.2 310 53.9
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 3.9e-75 285.8 290 56.2
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 6.6e-75 285.0 295 55.9
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 8.6e-75 284.6 218 63.8
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 8.6e-75 284.6 295 56.6
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.9e-74 283.5 279 56.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 4.7e-73 278.9 205 69.8
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.2e-71 274.2 199 67.8
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.9e-70 269.6 281 53.4
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 3.2e-69 266.2 200 68.5
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 3.2e-69 266.2 224 59.4
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 4.6e-68 262.3 276 52.9
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.5e-66 257.3 178 69.1
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 4.3e-66 255.8 202 60.9
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 8.1e-65 251.5 173 70.5
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 9.0e-64 248.1 240 54.6
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.2e-63 247.7 202 59.9
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.8e-63 245.4 178 69.1
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.2e-62 243.4 267 53.6
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.1e-61 238.4 256 50.8
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 1.8e-56 223.8 238 54.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 3.0e-51 206.5 138 73.9
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.7e-49 199.5 224 51.8
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.8e-48 197.2 227 53.3
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 9.0e-48 194.9 197 53.3
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 6.5e-38 162.2 197 42.6
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 9.3e-37 158.3 151 57.6
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 6.7e-35 152.1 199 42.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.3e-33 147.9 92 77.2
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 2.2e-33 147.1 101 71.3
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 2.0e-31 140.6 94 69.1
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.3e-30 137.9 83 77.1
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 4.2e-29 132.9 110 57.3
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 9.4e-29 131.7 201 37.8
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 5.1e-27 125.9 169 45.0
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.8e-24 117.5 116 48.3
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-21 108.2 77 70.1
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 5.7e-18 95.9 67 65.7
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.8e-17 92.8 112 46.4
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 1.4e-16 91.3 71 66.2
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.7e-14 84.3 56 73.2
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.9e-14 83.6 49 77.6
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.9e-13 80.9 68 52.9
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.8e-11 74.3 58 55.2
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.8e-08 64.3 39 74.4
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 7.7e-07 58.9 60 45.0


User provided reference genes

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