Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18868 Avicennia marina HOM05D006726 ORTHO05D008328 4.7e-258 894.0 456 100.0
Migut.D02543 Erythranthe guttata HOM05D006726 ORTHO05D008328 5.0e-135 485.3 414 61.8
Dinv13438 Davidia involucrata HOM05D006726 ORTHO05D008328 2.3e-116 423.3 406 56.7
GSVIVG01025422001 Vitis vinifera HOM05D006726 ORTHO05D008328 1.5e-115 420.6 421 51.8
SGA_v2.0_scaffold6G03420 Striga asiatica HOM05D006726 ORTHO05D008328 3.5e-112 409.5 398 56.3
Cc01_g02530 Coffea canephora HOM05D006726 ORTHO05D008328 5.0e-111 405.6 412 52.4
Actinidia06849 Actinidia chinensis HOM05D006726 ORTHO05D008328 6.6e-111 405.2 417 53.7
Rhsim13G0230700 Rhododendron simsii HOM05D006726 ORTHO05D008328 1.6e-109 400.6 416 53.1
SalBow6G1149 Salvia bowleyana HOM05D006726 ORTHO05D008328 4.0e-108 396.0 414 55.6
QL01p008136 Quercus lobata HOM05D006726 ORTHO05D008328 3.4e-107 392.9 417 53.7
VMungo0251G2876 Vigna mungo HOM05D006726 ORTHO05D008328 4.4e-107 392.5 378 57.4
TAR636G2476 Trochodendron aralioides HOM05D006726 ORTHO05D008328 9.2e-105 384.8 415 50.6
Phvul.002G235500 Phaseolus vulgaris HOM05D006726 ORTHO05D008328 7.8e-104 381.7 383 55.4
Glyma.08G113300 Glycine max HOM05D006726 ORTHO05D008328 1.3e-103 380.9 421 52.0
Glyma.05G155400 Glycine max HOM05D006726 ORTHO05D008328 3.3e-102 376.3 427 52.5
CSS0004752 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.3e-102 375.9 363 55.4
vmacro04222 Vaccinium macrocarpon HOM05D006726 ORTHO05D008328 4.3e-102 375.9 363 55.4
MD03G1007100 Malus domestica HOM05D006726 ORTHO05D008328 4.0e-100 369.4 378 55.0
Potri.003G218100 Populus trichocarpa HOM05D006726 ORTHO05D008328 8.9e-100 368.2 371 55.0
Prupe.6G006700 Prunus persica HOM05D006726 ORTHO05D008328 2.0e-99 367.1 373 54.4
TPR.G24412 Trifolium pratense HOM05D006726 ORTHO05D008328 7.5e-99 365.2 372 54.0
Ca_17954_v3 Cicer arietinum L. HOM05D006726 ORTHO05D008328 2.2e-98 363.6 395 52.7
Lj4g0004177 Lotus japonicus HOM05D006726 ORTHO05D008328 2.2e-98 363.6 379 53.8
Ciclev10015417m.g Citrus clementina HOM05D006726 ORTHO05D008328 2.9e-98 363.2 421 48.9
CiPaw.13G175000 Carya illinoinensis HOM05D006726 ORTHO05D008328 6.4e-98 362.1 422 49.8
Sabra03G0162700 Salix brachista HOM05D006726 ORTHO05D008328 2.4e-97 360.1 371 54.4
Duzib170G1137 Durio zibethinus HOM05D006726 ORTHO05D008328 9.2e-97 358.2 371 52.6
Atru.chr3.2327 Acer truncatum HOM05D006726 ORTHO05D008328 1.2e-96 357.8 421 48.9
arahy.Tifrunner.gnm1.ann1.FL4TQK Arachis hypogaea HOM05D006726 ORTHO05D008328 2.1e-96 357.1 380 52.4
ECA233G4338 Erigeron canadensis HOM05D006726 ORTHO05D008328 6.0e-96 355.5 377 52.8
Gorai.004G017200 Gossypium raimondii HOM05D006726 ORTHO05D008328 1.0e-95 354.8 419 48.9
PGSC0003DMG400032136 Solanum tuberosum HOM05D006726 ORTHO05D008328 1.7e-95 354.0 414 48.6
Medtr8g085620 Medicago truncatula HOM05D006726 ORTHO05D008328 3.0e-95 353.2 363 52.9
PGR119G2317 Punica granatum HOM05D006726 ORTHO05D008328 5.1e-95 352.4 368 52.7
arahy.Tifrunner.gnm1.ann1.GT4ACT Arachis hypogaea HOM05D006726 ORTHO05D008328 6.6e-95 352.1 380 51.3
Haze_22974 Corylus avellana HOM05D006726 ORTHO05D008328 6.6e-95 352.1 380 51.8
Gohir.A08G011400 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.6e-95 352.1 419 48.9
Gohir.D08G021900 Gossypium hirsutum HOM05D006726 ORTHO05D008328 6.6e-95 352.1 419 48.7
Lj2C718T3 Lonicera japonica HOM05D006726 ORTHO05D008328 6.6e-95 352.1 333 56.8
COL.COLO4_35015 Corchorus olitorius HOM05D006726 ORTHO05D008328 8.6e-95 351.7 368 52.2
Nitab4.5_0000775g0040 Nicotiana tabacum HOM05D006726 ORTHO05D008328 3.3e-94 349.7 413 48.4
Solyc01g005930.3 Solanum lycopersicum HOM05D006726 ORTHO05D008328 1.2e-93 347.8 414 48.6
Lalb_Chr07g0186641 Lupinus albus HOM05D006726 ORTHO05D008328 8.1e-93 345.1 376 51.3
Psat7g073840 Pisum sativum HOM05D006726 ORTHO05D008328 4.0e-92 342.8 359 54.6
Nitab4.5_0001059g0100 Nicotiana tabacum HOM05D006726 ORTHO05D008328 3.4e-91 339.7 420 46.2
RcHm_v2.0_Chr5g0082841 Rosa chinensis HOM05D006726 ORTHO05D008328 4.4e-91 339.3 416 48.8
CANSAT11G1445 Cannabis sativa HOM05D006726 ORTHO05D008328 5.8e-91 339.0 375 49.9
Sed0027506 Sechium edule HOM05D006726 ORTHO05D008328 3.8e-90 336.3 420 46.4
Hund07578 Selenicereus undatus HOM05D006726 ORTHO05D008328 8.4e-90 335.1 400 47.8
Manes.03G084600 Manihot esculenta HOM05D006726 ORTHO05D008328 1.1e-89 334.7 385 49.4
EL10Ac4g10360 Beta vulgaris HOM05D006726 ORTHO05D008328 2.4e-89 333.6 403 46.4
ClCG03G012030 Citrullus lanatus HOM05D006726 ORTHO05D008328 2.4e-89 333.6 417 47.5
Lsat_1_v5_gn_6_52180 Lactuca sativa HOM05D006726 ORTHO05D008328 5.4e-89 332.4 409 48.4
Sopen01g001940 Solanum pennellii HOM05D006726 ORTHO05D008328 9.2e-89 331.6 414 46.9
TWI34G0208 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.2e-88 331.3 388 47.4
TWI34G0698 Tripterygium wilfordii HOM05D006726 ORTHO05D008328 1.2e-88 331.3 388 47.4
HanXRQChr13g0405181 Helianthus annuus HOM05D006726 ORTHO05D008328 1.6e-88 330.9 409 46.0
CAN.G158.14 Capsicum annuum HOM05D006726 ORTHO05D008328 2.1e-88 330.5 406 47.8
FAN21G0710 Fragaria x ananassa HOM05D006726 ORTHO05D008328 3.0e-87 326.6 352 53.4
FAN25G0869 Fragaria x ananassa HOM05D006726 ORTHO05D008328 6.6e-87 325.5 352 52.8
Peaxi162Scf00100g00318 Petunia axillaris HOM05D006726 ORTHO05D008328 1.1e-86 324.7 419 45.6
DCAR_026158 Daucus carota HOM05D006726 ORTHO05D008328 1.9e-86 323.9 360 50.6
FAN16G2093 Fragaria x ananassa HOM05D006726 ORTHO05D008328 1.9e-86 323.9 353 53.0
FvH4_3g45230 Fragaria vesca HOM05D006726 ORTHO05D008328 7.3e-86 322.0 354 53.4
Aqoxy1G00428 Aquilegia oxysepala HOM05D006726 ORTHO05D008328 4.7e-85 319.3 401 46.9
FAN11G1313 Fragaria x ananassa HOM05D006726 ORTHO05D008328 2.4e-84 317.0 354 53.1
MELO3C015045.2 Cucumis melo HOM05D006726 ORTHO05D008328 1.2e-83 314.7 418 44.5
CsaV3_1G043900 Cucumis sativus L. HOM05D006726 ORTHO05D008328 1.5e-83 314.3 420 44.3
C03p92580 Brassica napus HOM05D006726 ORTHO05D008328 5.4e-81 305.8 447 42.7
Eucgr.J01803 Eucalyptus grandis HOM05D006726 ORTHO05D008328 9.3e-81 305.1 330 53.3
Sc09g0000200 Simmondsia chinensis HOM05D006726 ORTHO05D008328 1.2e-80 304.7 325 48.9
Thhalv10011547m.g Eutrema salsugineum HOM05D006726 ORTHO05D008328 4.6e-80 302.8 384 45.6
AUR62019186 Chenopodium quinoa HOM05D006726 ORTHO05D008328 6.0e-80 302.4 373 45.6
PSO339G4123 Papaver somniferum HOM05D006726 ORTHO05D008328 2.3e-79 300.4 374 44.9
BolC3t21572H Brassica oleracea HOM05D006726 ORTHO05D008328 3.0e-79 300.1 370 46.8
Cpa.g.sc119.74 Carica papaya HOM05D006726 ORTHO05D008328 6.6e-79 298.9 325 51.7
Sp1g40950 Schrenkiella parvula HOM05D006726 ORTHO05D008328 2.5e-78 297.0 386 46.9
Thecc.09G210400 Theobroma cacao HOM05D006726 ORTHO05D008328 4.3e-78 296.2 379 45.9
Nn2g15797 Nelumbo nucifera HOM05D006726 ORTHO05D008328 3.6e-77 293.1 355 48.7
THA.LOC104810333 Tarenaya hassleriana HOM05D006726 ORTHO05D008328 1.4e-76 291.2 420 43.8
ATR0001G014 Amborella trichopoda HOM05D006726 ORTHO05D008328 1.8e-76 290.8 373 46.4
BcaC01g01509 Brassica carinata HOM05D006726 ORTHO05D008328 2.4e-76 290.4 381 44.6
AT1G55280 Arabidopsis thaliana HOM05D006726 ORTHO05D008328 6.9e-76 288.9 384 45.3
CARHR044940 Cardamine hirsuta HOM05D006726 ORTHO05D008328 2.9e-74 283.5 409 44.5
A08p00750 Brassica napus HOM05D006726 ORTHO05D008328 9.3e-73 278.5 382 44.0
BraA08t32132Z Brassica rapa HOM05D006726 ORTHO05D008328 9.3e-73 278.5 382 44.0
Actinidia16259 Actinidia chinensis HOM05D006726 ORTHO05D008328 2.3e-71 273.9 319 50.8
AL1G63330 Arabidopsis lyrata HOM05D006726 ORTHO05D008328 1.5e-70 271.2 383 43.6
PSO384G1418 Papaver somniferum HOM05D006726 ORTHO05D008328 9.6e-70 268.5 360 43.1
HPP92_006110 Vanilla planifolia HOM05D006726 ORTHO05D008328 3.3e-62 243.4 388 38.4
CSS0003958 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.2e-61 239.2 240 53.8
CSS0031538 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 6.2e-61 239.2 240 53.8
BcaB04g16967 Brassica carinata HOM05D006726 ORTHO05D008328 8.2e-61 238.8 304 45.1
MBI01_g14456_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 9.0e-60 235.3 360 40.8
Os11g0491400 Oryza sativa ssp. japonica HOM05D006726 ORTHO05D008328 2.5e-57 227.3 399 37.1
Carub.0001s4379 Capsella rubella HOM05D006726 ORTHO05D008328 1.6e-56 224.6 307 42.7
AUR62000016 Chenopodium quinoa HOM05D001875 ORTHO05D008328 4.6e-56 223.0 283 44.5
Hma1.2p1_0843F.1_g227250 Hydrangea macrophylla HOM05D006726 ORTHO05D008328 2.3e-55 220.7 244 52.0
Zm00001eb169450 Zea mays HOM05D006726 ORTHO05D008328 1.6e-53 214.5 369 39.6
CDE06G2716 Ceratophyllum demersum HOM05D006726 ORTHO05D008328 2.0e-51 207.6 369 39.6
MBI01_g46956_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 2.1e-40 171.0 260 40.4
unitig_749.g13586 Utricularia gibba HOM05D006726 ORTHO05D008328 7.9e-40 169.1 179 55.3
CSS0027573 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 4.1e-36 156.8 239 41.0
Pp3c13_13690 Physcomitrium patens HOM05D006726 ORTHO05D008328 2.0e-35 154.5 331 34.7
Aa31LG10G1050 Aethionema arabicum HOM05D006726 ORTHO05D008328 1.9e-33 147.9 234 38.9
CSS0014249 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.5e-33 146.4 125 59.2
CSS0044208 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 5.5e-33 146.4 125 59.2
C03p92600 Brassica napus HOM05D006726 ORTHO05D008328 1.0e-31 142.1 151 51.0
Mapoly0036s0044 Marchantia polymorpha HOM05D006726 ORTHO05D008328 1.7e-29 134.8 391 29.7
unitig_749.g13585 Utricularia gibba HOM05D006726 ORTHO05D008328 6.3e-29 132.9 168 45.8
CSS0045731 Camellia sinensis var. sinensis HOM05D006726 ORTHO05D008328 1.6e-27 128.3 116 57.8
BcaC01g01511 Brassica carinata HOM05D006726 ORTHO05D008328 2.7e-24 117.5 153 46.4
AagrBONN_evm.TU.Sc2ySwM_368.685 Anthoceros agrestis HOM05D006726 ORTHO05D008328 1.8e-23 114.8 341 31.4
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 1.5e-22 111.7 208 37.5
SMO268G0018 Selaginella moellendorffii HOM05D006726 ORTHO05D008328 3.7e-21 107.1 350 28.9
MBI01_g46957_MAGBIO Magnolia biondii HOM05D006726 ORTHO05D008328 1.7e-18 98.2 131 41.2
MCO10G213 Micromonas commoda HOM05D006726 ORTHO05D008328 1.2e-11 75.5 316 24.7
Cre09.g400997 Chlamydomonas reinhardtii HOM05D006726 ORTHO05D008328 2.5e-09 67.8 336 25.0
Lalb_Chr13g0294981 Lupinus albus HOM05D006726 ORTHO05D008328 1.2e-06 58.9 62 51.6
CBR_g4449 Chara braunii HOM05D006726 ORTHO05D008328 3.4e-06 57.4 154 32.5


User provided reference genes

Program Settings