Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18506 Avicennia marina HOM05D001772 ORTHO05D000476 3.6e-67 258.1 128 100.0
Migut.D00773 Erythranthe guttata HOM05D001772 ORTHO05D000476 4.3e-36 154.8 134 62.7
SGA_v2.0_scaffold8G04491 Striga asiatica HOM05D001772 ORTHO05D000476 6.3e-35 151.0 125 64.0
Cc01_g15860 Coffea canephora HOM05D001772 ORTHO05D000476 3.6e-30 135.2 127 60.6
GSVIVG01001530001 Vitis vinifera HOM05D001772 ORTHO05D000476 3.6e-30 135.2 126 58.7
Actinidia23345 Actinidia chinensis HOM05D001772 ORTHO05D000476 6.1e-30 134.4 128 53.9
RcHm_v2.0_Chr6g0282201 Rosa chinensis HOM05D001772 ORTHO05D000476 6.1e-30 134.4 127 55.9
FvH4_2g17470 Fragaria vesca HOM05D001772 ORTHO05D000476 7.4e-28 127.5 127 52.8
CAN.G311.18 Capsicum annuum HOM05D001772 ORTHO05D000476 3.7e-27 125.2 126 57.1
SalBow3G3719 Salvia bowleyana HOM05D001772 ORTHO05D000476 7.0e-26 120.9 111 60.4
Nn7g37462 Nelumbo nucifera HOM05D001772 ORTHO05D000476 9.1e-26 120.6 134 53.7
Solyc09g042770.4 Solanum lycopersicum HOM05D001772 ORTHO05D000476 2.6e-25 119.0 133 53.4
Prupe.8G187000 Prunus persica HOM05D001772 ORTHO05D000476 4.5e-25 118.2 126 50.0
Peaxi162Scf02239g00025 Petunia axillaris HOM05D001772 ORTHO05D000476 5.9e-25 117.9 126 54.0
MD10G1147900 Malus domestica HOM05D001772 ORTHO05D000476 1.3e-24 116.7 127 51.2
Manes.12G055400 Manihot esculenta HOM05D001772 ORTHO05D000476 3.8e-24 115.2 127 51.2
Sed0023396 Sechium edule HOM05D001772 ORTHO05D000476 5.0e-24 114.8 126 50.0
Sopen09g015820 Solanum pennellii HOM05D001772 ORTHO05D000476 6.5e-24 114.4 133 51.9
PGSC0003DMG400021910 Solanum tuberosum HOM05D001772 ORTHO05D000476 1.1e-23 113.6 126 54.0
TWI36G1769 Tripterygium wilfordii HOM05D001772 ORTHO05D000476 1.1e-23 113.6 126 50.8
MBI10_g28842_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D000476 1.5e-23 113.2 135 51.9
Dinv28791 Davidia involucrata HOM05D001772 ORTHO05D000476 2.5e-23 112.5 111 53.2
Potri.002G239800 Populus trichocarpa HOM05D001772 ORTHO05D000476 4.2e-23 111.7 128 51.6
Sed0027176 Sechium edule HOM05D001772 ORTHO05D000476 7.2e-23 110.9 126 46.0
TAR362G0313 Trochodendron aralioides HOM05D001772 ORTHO05D000476 9.4e-23 110.5 127 51.2
Lsat_1_v5_gn_9_16941 Lactuca sativa HOM05D001772 ORTHO05D000476 1.6e-22 109.8 127 54.3
Duzib133G1118 Durio zibethinus HOM05D001772 ORTHO05D000476 2.1e-22 109.4 128 50.8
PGR044G1970 Punica granatum HOM05D001772 ORTHO05D000476 2.1e-22 109.4 132 47.7
Eucgr.K02359 Eucalyptus grandis HOM05D001772 ORTHO05D000476 2.7e-22 109.0 128 50.0
Thecc.01G207500 Theobroma cacao HOM05D001772 ORTHO05D000476 6.1e-22 107.8 130 49.2
Dinv35446 Davidia involucrata HOM05D001772 ORTHO05D000476 1.4e-21 106.7 111 53.2
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.8e-21 106.3 139 50.4
Actinidia12853 Actinidia chinensis HOM05D001772 ORTHO05D000476 1.8e-21 106.3 139 50.4
Lalb_Chr03g0040551 Lupinus albus HOM05D001772 ORTHO05D000476 3.0e-21 105.5 133 48.1
Gohir.D08G058300 Gossypium hirsutum HOM05D001772 ORTHO05D000476 8.8e-21 104.0 128 48.4
Medtr7g080890 Medicago truncatula HOM05D001772 ORTHO05D000476 1.5e-20 103.2 131 47.3
Os01g0889800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D000476 1.5e-20 103.2 133 48.1
Gorai.004G060200 Gossypium raimondii HOM05D001772 ORTHO05D000476 2.0e-20 102.8 128 48.4
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 2.6e-20 102.4 112 48.2
Rhsim01G0247500 Rhododendron simsii HOM05D001772 ORTHO05D000476 2.6e-20 102.4 67 73.1
Psat3g100920 Pisum sativum HOM05D001772 ORTHO05D000476 4.4e-20 101.7 133 46.6
HanXRQChr07g0190571 Helianthus annuus HOM05D001772 ORTHO05D000476 5.7e-20 101.3 131 49.6
Nitab4.5_0008926g0020 Nicotiana tabacum HOM05D001772 ORTHO05D000476 5.7e-20 101.3 127 50.4
PSO170G5618 Papaver somniferum HOM05D001772 ORTHO05D000476 7.4e-20 100.9 129 45.0
MELO3C021127.2 Cucumis melo HOM05D001772 ORTHO05D000476 9.7e-20 100.5 126 46.8
ECA247G0275 Erigeron canadensis HOM05D001772 ORTHO05D000476 1.3e-19 100.1 130 48.5
Gohir.A08G048200 Gossypium hirsutum HOM05D001772 ORTHO05D000476 1.7e-19 99.8 127 48.0
Lj1g0002706 Lotus japonicus HOM05D001772 ORTHO05D000476 2.8e-19 99.0 136 44.1
PSO357G0631 Papaver somniferum HOM05D001772 ORTHO05D000476 2.8e-19 99.0 129 46.5
Ca_08035_v3 Cicer arietinum L. HOM05D001772 ORTHO05D000476 4.8e-19 98.2 133 46.6
vmacro14687 Vaccinium macrocarpon HOM05D001772 ORTHO05D000476 1.4e-18 96.7 64 70.3
arahy.Tifrunner.gnm1.ann1.6LLT9T Arachis hypogaea HOM05D001772 ORTHO05D000476 3.1e-18 95.5 128 43.8
arahy.Tifrunner.gnm1.ann1.Z5E7XJ Arachis hypogaea HOM05D001772 ORTHO05D000476 7.0e-18 94.4 130 44.6
TPR.G35837 Trifolium pratense HOM05D001772 ORTHO05D000476 1.6e-17 93.2 133 45.1
Nitab4.5_0000038g0390 Nicotiana tabacum HOM05D001772 ORTHO05D000476 2.6e-17 92.4 60 71.7
Actinidia29996 Actinidia chinensis HOM05D001772 ORTHO05D000476 7.7e-17 90.9 58 69.0
Lj2C1111T5 Lonicera japonica HOM05D001772 ORTHO05D000476 7.7e-17 90.9 110 48.2
AUR62028644 Chenopodium quinoa HOM05D001772 ORTHO05D000476 1.3e-16 90.1 58 67.2
Haze_03506 Corylus avellana HOM05D001772 ORTHO05D000476 2.2e-16 89.4 74 58.1
Cpa.g.sc8.39 Carica papaya HOM05D001772 ORTHO05D000476 2.9e-16 89.0 121 46.3
AUR62008067 Chenopodium quinoa HOM05D001772 ORTHO05D000476 3.8e-16 88.6 58 67.2
ClCG09G008340 Citrullus lanatus HOM05D001772 ORTHO05D002266 5.0e-16 88.2 117 44.4
MD05G1153600 Malus domestica HOM05D001772 ORTHO05D000476 8.5e-16 87.4 60 65.0
Sabra02G0182600 Salix brachista HOM05D001772 ORTHO05D000476 1.1e-15 87.0 113 46.0
Cfa010573 Carpinus fangiana HOM05D001772 ORTHO05D000476 1.5e-15 86.7 74 56.8
Sc17g0001580 Simmondsia chinensis HOM05D001772 ORTHO05D000476 4.2e-15 85.1 58 67.2
CiPaw.14G044200 Carya illinoinensis HOM05D001772 ORTHO05D000476 7.2e-15 84.3 73 56.2
Hund02807 Selenicereus undatus HOM05D001772 ORTHO05D000476 1.6e-14 83.2 49 73.5
CiPaw.13G055700 Carya illinoinensis HOM05D001772 ORTHO05D000476 3.6e-14 82.0 60 63.3
EL10Ac5g10585 Beta vulgaris HOM05D001772 ORTHO05D000476 8.0e-14 80.9 61 60.7
Glyma.09G246300 Glycine max HOM05D001772 ORTHO05D000476 8.0e-14 80.9 119 46.2
QL09p045418 Quercus lobata HOM05D001772 ORTHO05D000476 8.0e-14 80.9 74 56.8
COL.COLO4_34275 Corchorus olitorius HOM05D001772 ORTHO05D000476 1.0e-13 80.5 116 44.0
Phvul.008G050400 Phaseolus vulgaris HOM05D001772 ORTHO05D000476 1.4e-13 80.1 117 41.9
CANSAT01G0681 Cannabis sativa HOM05D001772 ORTHO05D000476 6.8e-13 77.8 47 74.5
Ciclev10016082m.g Citrus clementina HOM05D001772 ORTHO05D000476 6.8e-13 77.8 82 52.4
CsaV3_7G026740 Cucumis sativus L. HOM05D000439 ORTHO05D001363 5.7e-12 74.7 124 40.3
VMungo1383G2637 Vigna mungo HOM05D001772 ORTHO05D000476 5.7e-12 74.7 113 42.5
Zm00001eb365870 Zea mays HOM05D001772 ORTHO05D000476 9.8e-12 73.9 55 61.8
CDE02G4114 Ceratophyllum demersum HOM05D001772 ORTHO05D000476 1.7e-11 73.2 114 38.6
AL3G41600 Arabidopsis lyrata HOM05D001772 ORTHO05D000476 2.8e-11 72.4 48 68.8
AT3G25480 Arabidopsis thaliana HOM05D001772 ORTHO05D000476 2.8e-11 72.4 48 68.8
CARHR101780 Cardamine hirsuta HOM05D001772 ORTHO05D000476 8.3e-11 70.9 53 60.4
BcaC01g03224 Brassica carinata HOM05D001772 ORTHO05D000476 1.1e-10 70.5 49 65.3
A03p44200 Brassica napus HOM05D001772 ORTHO05D000476 1.1e-10 70.5 49 65.3
C03p54580 Brassica napus HOM05D001772 ORTHO05D000476 1.1e-10 70.5 49 65.3
BolC3t17745H Brassica oleracea HOM05D001772 ORTHO05D000476 1.1e-10 70.5 49 65.3
BraA03t13549Z Brassica rapa HOM05D001772 ORTHO05D000476 1.1e-10 70.5 49 65.3
Aa31LG9G5680 Aethionema arabicum HOM05D001772 ORTHO05D000476 1.8e-10 69.7 55 60.0
Aqoxy5G00066 Aquilegia oxysepala HOM05D001772 ORTHO05D000476 1.8e-10 69.7 116 38.8
Thhalv10002639m.g Eutrema salsugineum HOM05D001772 ORTHO05D000476 2.4e-10 69.3 49 63.3
Carub.0003s2580 Capsella rubella HOM05D001772 ORTHO05D000476 3.1e-10 68.9 47 66.0
Sp3g23000 Schrenkiella parvula HOM05D001772 ORTHO05D000476 7.0e-10 67.8 49 61.2
BcaB08g34454 Brassica carinata HOM05D001772 ORTHO05D000476 9.1e-10 67.4 43 69.8
THA.LOC104808817 Tarenaya hassleriana HOM05D001772 ORTHO05D000476 9.1e-10 67.4 88 45.5
CDE09G0012 Ceratophyllum demersum HOM05D001772 ORTHO05D000476 2.7e-09 65.9 96 38.5
unitig_62.g23942 Utricularia gibba HOM05D001772 ORTHO05D000476 2.2e-08 62.8 50 62.0
ATR0250G001 Amborella trichopoda HOM05D001772 ORTHO05D000476 1.9e-07 59.7 104 38.5


User provided reference genes

Program Settings