Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.4e-57 226.5 153 100.0
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 4.7e-21 105.1 152 44.7
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.8e-20 103.2 172 43.6
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 5.8e-19 98.2 146 43.8
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 2.2e-18 96.3 135 45.2
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 8.3e-18 94.4 138 45.7
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.1e-17 94.0 151 41.1
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 2.4e-17 92.8 163 40.5
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 3.2e-17 92.4 150 42.7
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.2e-17 92.4 153 41.8
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.4e-17 91.7 147 46.3
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 5.4e-17 91.7 147 46.3
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 9.2e-17 90.9 150 42.0
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 1.6e-16 90.1 147 41.5
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 2.1e-16 89.7 148 40.5
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 2.7e-16 89.4 137 41.6
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 4.6e-16 88.6 151 41.1
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 1.3e-15 87.0 142 41.5
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.7e-15 86.7 163 37.4
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.7e-15 86.7 156 39.7
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-15 86.3 161 39.1
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.3e-15 86.3 153 37.9
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 3.9e-15 85.5 141 41.1
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.1e-15 85.1 161 38.5
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 5.1e-15 85.1 160 38.1
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 1.1e-14 84.0 150 40.7
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 5.6e-14 81.6 159 36.5
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 5.6e-14 81.6 155 38.7
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 5.6e-14 81.6 156 37.8
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 7.3e-14 81.3 160 37.5
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 9.5e-14 80.9 152 37.5
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 9.5e-14 80.9 155 38.1
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 1.2e-13 80.5 159 35.8
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 1.2e-13 80.5 153 38.6
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.6e-13 80.1 161 36.6
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.1e-13 79.7 132 41.7
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 2.8e-13 79.3 151 38.4
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 2.8e-13 79.3 135 41.5
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 3.6e-13 79.0 168 36.3
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.6e-13 79.0 159 35.2
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 3.6e-13 79.0 153 38.6
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 6.2e-13 78.2 159 35.2
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 1.1e-12 77.4 159 38.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 1.4e-12 77.0 166 35.5
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 1.4e-12 77.0 139 38.8
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.8e-12 76.6 155 34.8
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.8e-12 76.6 130 42.3
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 1.8e-12 76.6 174 33.9
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.3e-12 76.3 167 38.9
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 2.3e-12 76.3 160 37.5
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.1e-12 75.9 160 37.5
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 3.1e-12 75.9 141 38.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 3.1e-12 75.9 140 40.0
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 4.0e-12 75.5 137 40.1
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.2e-12 75.1 159 37.1
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 5.2e-12 75.1 172 34.3
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 5.2e-12 75.1 148 39.2
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 5.2e-12 75.1 144 35.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 5.2e-12 75.1 142 38.0
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 8.9e-12 74.3 171 36.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 1.2e-11 73.9 173 34.7
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-11 73.9 161 37.9
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.2e-11 73.9 136 39.7
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.5e-11 73.6 172 47.7
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.5e-11 73.6 172 45.3
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.0e-11 73.2 149 36.9
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 2.0e-11 73.2 148 35.8
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.0e-11 73.2 144 38.9
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 2.6e-11 72.8 149 40.9
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.6e-11 72.8 139 38.1
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 3.4e-11 72.4 149 36.9
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.4e-11 72.4 136 38.2
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.4e-11 72.0 142 38.0
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 7.6e-11 71.2 152 34.2
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.6e-11 71.2 135 37.8
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.2e-10 69.7 148 36.5
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 2.2e-10 69.7 161 51.6
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 2.9e-10 69.3 145 37.9
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 2.9e-10 69.3 151 34.4
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.8e-10 68.9 137 38.0
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.8e-10 68.9 154 35.7
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 3.8e-10 68.9 162 32.7
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 6.4e-10 68.2 166 48.2
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 8.4e-10 67.8 171 48.0
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 1.1e-09 67.4 176 32.4
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-09 67.0 137 37.2
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 1.9e-09 66.6 138 44.9
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 4.1e-09 65.5 180 42.8
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 4.1e-09 65.5 161 32.3
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 1.6e-08 63.5 172 31.4
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 2.7e-08 62.8 151 32.5
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 4.6e-08 62.0 77 42.9
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 6.0e-08 61.6 133 35.3
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 6.0e-08 61.6 132 35.6
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 1.3e-07 60.5 103 38.8
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.7e-07 60.1 139 33.1
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 1.7e-07 60.1 123 35.8
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 2.3e-07 59.7 139 36.7
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 2.3e-07 59.7 139 50.4
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 3.0e-07 59.3 77 45.5
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 5.1e-07 58.5 155 31.6
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.6e-07 58.2 96 41.7
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 6.6e-07 58.2 101 52.5
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 6.6e-07 58.2 148 34.5
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 8.6e-07 57.8 138 32.6
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 8.6e-07 57.8 136 36.0
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 8.6e-07 57.8 141 34.8
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.1e-06 57.4 85 43.5
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 1.5e-06 57.0 88 43.2
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.9e-06 56.6 142 34.5
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 2.5e-06 56.2 139 35.3
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 2.5e-06 56.2 136 34.6
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 3.3e-06 55.8 143 32.9
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 3.3e-06 55.8 151 49.7
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 3.3e-06 55.8 141 48.9
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 3.3e-06 55.8 151 49.7
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 3.3e-06 55.8 141 48.9
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 3.3e-06 55.8 84 42.9
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 3.3e-06 55.8 150 32.0
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 5.6e-06 55.1 141 33.3
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 5.6e-06 55.1 141 33.3
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 5.6e-06 55.1 156 32.7
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 5.6e-06 55.1 155 32.9
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 5.6e-06 55.1 172 28.5
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 5.6e-06 55.1 152 28.3
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 7.3e-06 54.7 143 34.3


User provided reference genes

Program Settings