Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18464 Avicennia marina HOM05D006694 ORTHO05D008240 9.8e-96 355.5 744 100.0
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.4e-38 165.6 193 48.7
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.2e-37 162.5 193 48.2
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 4.6e-37 160.6 193 47.7
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 6.0e-37 160.2 192 47.4
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 4.5e-32 144.1 190 44.2
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 2.6e-24 118.2 194 35.6
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.0e-23 116.3 131 48.1
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 1.1e-22 112.8 188 33.5
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.9e-22 112.1 175 40.0
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 3.5e-21 107.8 179 37.4
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 4.6e-21 107.5 179 36.9
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.0e-20 106.3 196 34.7
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.3e-20 105.9 155 36.8
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 2.5e-19 101.7 171 36.8
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.3e-18 99.4 149 34.9
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 1.6e-18 99.0 179 38.5
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 2.8e-18 98.2 183 34.4
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 4.1e-17 94.4 191 33.5
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 2.2e-15 88.6 154 34.4
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 2.9e-15 88.2 167 42.5
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 7.2e-14 83.6 190 30.0
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 1.6e-13 82.4 141 33.3
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 2.1e-13 82.0 189 30.7
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 4.6e-13 80.9 137 34.3
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.3e-12 79.3 179 30.2
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 3.9e-12 77.8 161 30.4
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 6.7e-12 77.0 161 29.2
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 8.7e-12 76.6 191 27.2
SalBow6G6678 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.1e-11 76.3 57 64.9
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.1e-11 76.3 149 30.2
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 1.5e-11 75.9 175 28.6
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 5.7e-11 73.9 174 30.5
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 7.4e-11 73.6 146 29.5
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 3.7e-10 71.2 174 28.7
Dinv15034 Davidia involucrata HOM05D006694 ORTHO05D008240 6.3e-10 70.5 90 43.3
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 4.1e-09 67.8 178 40.4
Ciclev10014456m.g Citrus clementina HOM05D006694 ORTHO05D008240 6.9e-09 67.0 63 54.0
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 1.2e-08 66.2 178 26.4
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 2.6e-08 65.1 185 24.9
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 2.6e-08 65.1 180 27.2
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.4e-08 64.7 151 29.1
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 4.5e-08 64.3 147 27.9
Rhsim13G0208900 Rhododendron simsii HOM05D006694 ORTHO05D008240 4.5e-08 64.3 60 53.3
MD15G1399800 Malus domestica HOM05D006694 ORTHO05D008240 5.9e-08 63.9 63 49.2
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 5.9e-08 63.9 56 50.0
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 7.7e-08 63.5 58 51.7
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.0e-07 63.2 158 27.2
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.0e-07 63.2 158 27.2
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 1.3e-07 62.8 163 27.6
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 1.7e-07 62.4 158 27.2
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.7e-07 62.4 158 27.2
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 2.2e-07 62.0 162 26.5
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.2e-07 62.0 150 28.7
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 2.9e-07 61.6 145 29.0
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.9e-07 61.6 53 50.9
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.8e-07 61.2 161 29.2
Actinidia24456 Actinidia chinensis HOM05D006694 ORTHO05D008240 5.0e-07 60.8 103 40.8
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 8.5e-07 60.1 58 48.3
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 8.5e-07 60.1 58 46.6
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 1.1e-06 59.7 183 26.8
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.1e-06 59.7 132 27.3
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 1.1e-06 59.7 61 49.2
Atru.chr3.2947 Acer truncatum HOM05D006694 ORTHO05D008240 4.2e-06 57.8 95 41.1
Atru.chr3.2963 Acer truncatum HOM05D006694 ORTHO05D008240 4.2e-06 57.8 95 41.1
Manes.01G178400 Manihot esculenta HOM05D006694 ORTHO05D008240 5.5e-06 57.4 63 47.6


User provided reference genes

Program Settings