Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 2.3e-88 328.9 177 100.0
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 7.8e-52 207.6 178 67.4
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 6.2e-49 198.0 171 60.8
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 8.9e-48 194.1 180 62.2
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 1.5e-47 193.4 179 58.7
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.5e-47 193.4 179 58.7
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 1.7e-46 189.9 164 61.0
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.9e-46 189.1 151 66.2
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 1.1e-45 187.2 163 63.2
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 1.9e-45 186.4 151 65.6
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 2.4e-45 186.0 179 59.2
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 7.1e-45 184.5 180 57.2
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 1.2e-44 183.7 146 65.1
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 1.6e-44 183.3 150 68.7
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 1.6e-44 183.3 183 57.4
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 6.0e-44 181.4 174 56.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 1.0e-43 180.6 179 55.9
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.3e-43 180.3 146 62.3
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 3.0e-43 179.1 184 58.2
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 5.1e-43 178.3 146 61.6
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 2.5e-42 176.0 174 56.3
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.5e-42 176.0 147 62.6
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 9.6e-42 174.1 146 63.7
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 2.1e-41 172.9 149 61.1
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 1.4e-40 170.2 185 54.1
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.8e-40 169.9 169 56.2
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 2.4e-40 169.5 177 54.2
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 3.1e-40 169.1 150 60.0
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.0e-40 168.7 158 60.8
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 4.0e-40 168.7 158 58.2
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 6.9e-40 167.9 152 61.2
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 6.9e-40 167.9 161 55.9
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.0e-40 167.5 152 60.5
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 4.4e-39 165.2 169 53.3
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 3.8e-38 162.2 179 53.1
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 4.9e-38 161.8 156 55.1
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 8.4e-38 161.0 164 54.9
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.1e-37 160.6 150 58.0
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 2.4e-37 159.5 181 54.1
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 3.2e-37 159.1 163 52.1
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 4.2e-37 158.7 171 53.8
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 7.1e-37 157.9 160 53.1
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 9.3e-37 157.5 162 54.3
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.3e-37 157.5 169 55.0
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 9.3e-37 157.5 162 53.1
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 3.5e-36 155.6 168 51.8
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.0e-35 154.1 160 52.5
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 2.3e-35 152.9 173 53.2
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.3e-35 152.9 149 54.4
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 3.9e-35 152.1 195 47.7
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 6.6e-35 151.4 152 56.6
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.5e-34 149.4 173 52.0
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 2.5e-34 149.4 177 50.8
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 4.3e-34 148.7 123 62.6
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 9.6e-34 147.5 173 50.9
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.6e-33 146.7 153 54.2
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.1e-33 146.4 211 43.6
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 3.6e-33 145.6 152 53.9
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 3.6e-33 145.6 176 50.0
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 8.1e-33 144.4 173 50.3
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 3.1e-32 142.5 152 53.9
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 4.0e-32 142.1 154 53.9
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 6.9e-32 141.4 195 48.2
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 6.9e-32 141.4 195 48.2
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 1.2e-31 140.6 127 61.4
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.2e-31 140.6 159 49.7
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 1.5e-31 140.2 180 50.0
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 2.0e-31 139.8 130 60.8
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 2.6e-31 139.4 185 50.3
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 4.5e-31 138.7 169 52.1
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 5.8e-31 138.3 178 48.9
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 7.6e-31 137.9 186 49.5
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 7.6e-31 137.9 139 54.7
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.2e-30 136.3 179 49.2
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 4.9e-30 135.2 160 48.1
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 8.4e-30 134.4 153 52.9
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 3.2e-29 132.5 118 61.9
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 3.2e-29 132.5 135 55.6
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 9.3e-29 131.0 111 59.5
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 1.6e-28 130.2 222 42.3
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 2.3e-27 126.3 103 60.2
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 3.0e-27 125.9 149 51.0
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 8.7e-27 124.4 106 60.4
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 5.6e-26 121.7 114 57.9
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 9.6e-26 120.9 124 58.9
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 4.5e-23 112.1 113 52.2
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 4.9e-22 108.6 133 48.1
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 8.4e-22 107.8 111 53.2
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 5.1e-19 98.6 121 50.4
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 8.2e-17 91.3 95 50.5
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 5.3e-16 88.6 56 76.8
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 2.5e-13 79.7 98 46.9
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 3.5e-12 75.9 120 39.2
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 4.6e-12 75.5 56 64.3
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.3e-11 73.9 55 67.3
ClCG07G001710 Citrullus lanatus HOM05D007485 ORTHO05D009437 9.7e-10 67.8 102 44.1
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 1.2e-07 60.8 118 33.1
Cre16.g687200 Chlamydomonas reinhardtii HOM05D007485 ORTHO05D009437 5.9e-07 58.5 160 30.6
THA.LOC104804650 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 1.3e-06 57.4 68 44.1
Mapoly0101s0026 Marchantia polymorpha HOM05D007485 ORTHO05D009437 5.0e-06 55.5 54 53.7


User provided reference genes

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