Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 0.0e+00 1285.4 653 100.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 9.2e-191 671.0 591 61.9
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 1.5e-177 627.1 658 56.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 4.4e-169 599.0 647 54.3
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 2.3e-117 427.2 684 41.4
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 3.1e-106 390.2 605 41.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 1.5e-103 381.3 684 39.6
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.4e-98 362.8 682 39.6
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 4.2e-95 353.2 629 39.6
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.0e-93 348.6 607 39.4
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 4.6e-89 333.2 628 38.4
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 6.6e-88 329.3 680 37.4
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 8.9e-85 318.9 681 36.3
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 1.2e-84 318.5 678 36.3
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 4.4e-84 316.6 594 38.7
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.7e-83 314.7 694 36.0
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.7e-83 314.7 518 40.0
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 9.2e-82 308.9 660 37.6
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 5.0e-80 303.1 677 35.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 1.8e-77 294.7 663 36.5
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 7.5e-76 289.3 596 37.9
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 2.9e-75 287.3 628 33.6
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.7e-73 280.8 666 35.3
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 7.8e-73 279.3 605 35.2
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 1.5e-71 275.0 572 37.1
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.5e-71 274.2 702 33.0
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.6e-71 273.1 681 32.3
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 7.3e-71 272.7 597 36.3
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 6.2e-70 269.6 585 35.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.8e-69 268.1 654 33.0
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.3e-69 267.7 696 33.8
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.0e-69 266.9 632 33.1
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 5.2e-69 266.5 629 33.9
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 8.9e-69 265.8 551 34.8
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.2e-68 265.4 444 39.9
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 1.5e-68 265.0 533 35.6
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.0e-68 264.6 635 34.3
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 3.4e-68 263.8 669 33.5
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 3.4e-68 263.8 600 35.0
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 5.8e-68 263.1 555 35.0
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 7.6e-68 262.7 575 36.2
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 7.6e-68 262.7 632 33.9
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 9.9e-68 262.3 596 34.7
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 9.9e-68 262.3 626 35.6
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 1.7e-67 261.5 595 33.6
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.7e-67 261.5 551 34.8
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.9e-67 260.8 595 33.9
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 4.9e-67 260.0 651 33.8
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 4.9e-67 260.0 555 35.1
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-66 258.8 605 34.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.4e-66 256.5 651 33.6
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.2e-65 255.4 602 34.9
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.7e-65 254.2 618 35.9
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 2.7e-65 254.2 590 32.0
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 6.0e-65 253.1 619 33.8
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 2.3e-64 251.1 656 30.9
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 3.0e-64 250.8 654 34.3
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 5.1e-64 250.0 616 33.0
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.1e-63 248.8 678 33.5
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.5e-63 247.7 586 32.4
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 4.3e-63 246.9 651 32.9
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 5.6e-63 246.5 523 35.6
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 2.1e-62 244.6 678 33.8
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 4.7e-62 243.4 678 33.5
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 4.7e-62 243.4 599 34.1
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 6.2e-62 243.0 702 31.1
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.1e-61 242.3 629 32.9
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 1.4e-61 241.9 584 32.2
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 2.4e-61 241.1 603 34.7
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.4e-61 241.1 671 32.2
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.1e-61 240.7 696 32.0
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.0e-61 240.4 685 31.4
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 5.2e-61 240.0 596 32.4
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.9e-61 239.2 675 32.0
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 3.4e-60 237.3 594 32.8
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 1.3e-59 235.3 678 31.4
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 4.9e-59 233.4 586 32.1
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 6.4e-59 233.0 650 33.8
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 6.4e-59 233.0 574 32.4
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 8.4e-59 232.6 552 33.0
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 8.4e-59 232.6 625 31.2
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.4e-58 231.9 674 31.9
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 2.1e-57 228.0 561 33.0
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 2.7e-57 227.6 666 30.8
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-56 225.7 516 34.9
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 6.6e-56 223.0 492 33.7
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 3.3e-55 220.7 509 35.6
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.2e-52 212.2 583 30.9
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 2.0e-52 211.5 315 39.0
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-50 205.7 661 31.5
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 1.5e-47 195.3 615 32.0
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 4.8e-46 190.3 709 29.5
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.9e-43 181.0 446 33.6
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 1.1e-42 179.1 522 32.8
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.6e-41 175.3 435 33.1
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 2.7e-41 174.5 412 32.3
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 4.6e-41 173.7 519 32.0
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 4.6e-41 173.7 324 37.7
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 2.3e-40 171.4 439 30.8
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 2.5e-39 167.9 309 34.6
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.7e-38 164.1 310 33.9
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 3.7e-38 164.1 404 34.7
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 2.4e-37 161.4 589 29.7
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 3.1e-37 161.0 585 30.9
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 9.0e-37 159.5 405 33.6
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 1.3e-35 155.6 639 30.4
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 3.2e-34 151.0 409 33.3
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 4.2e-34 150.6 411 34.5
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 5.5e-34 150.2 563 30.0
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 2.7e-33 147.9 520 30.8
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 7.9e-33 146.4 563 29.5
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 1.8e-32 145.2 572 30.8
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 9.0e-29 132.9 258 34.9
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 8.4e-27 126.3 164 45.1
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 1.3e-22 112.5 280 31.8
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 2.2e-22 111.7 257 34.6
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.4e-21 109.0 285 26.3
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 5.9e-20 103.6 325 28.9
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 1.3e-11 75.9 283 23.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.1e-09 68.6 220 30.0
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 6.1e-09 67.0 71 45.1
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 2.0e-07 62.0 108 36.1


User provided reference genes

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