Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1820 Avicennia marina HOM05D002584 ORTHO05D002736 0.0e+00 1290.8 714 100.0
Migut.E01233 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.3e-57 228.8 727 33.7
SGA_v2.0_scaffold144G35846 Striga asiatica HOM05D035903 ORTHO05D002736 1.4e-51 208.8 689 29.0
Oeu046819.1 Olea europaea HOM05D002584 ORTHO05D002736 8.3e-36 156.4 629 33.1
Dinv37552 Davidia involucrata HOM05D002584 ORTHO05D002736 3.5e-34 151.0 742 26.7
SGA_v2.0_scaffold111G31456 Striga asiatica HOM05D034841 ORTHO05D002736 1.5e-29 135.6 265 37.7
PGSC0003DMG400012162 Solanum tuberosum HOM05D002584 ORTHO05D002736 8.6e-25 119.8 725 24.6
Dinv38860 Davidia involucrata HOM05D002584 ORTHO05D002736 1.5e-21 109.0 678 25.2
Cc08_g15750 Coffea canephora HOM05D002584 ORTHO05D002736 7.6e-21 106.7 368 29.3
Solyc08g082000.4 Solanum lycopersicum HOM05D002584 ORTHO05D002736 2.2e-20 105.1 505 27.5
Migut.E01018 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.9e-19 102.1 139 42.4
Migut.O00408 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.4e-19 101.7 141 41.8
TAR375G0150 Trochodendron aralioides HOM05D002584 ORTHO05D002736 2.1e-18 98.6 407 29.0
Sopen08g030300 Solanum pennellii HOM05D002584 ORTHO05D002736 3.5e-18 97.8 498 26.7
PSO063G1767 Papaver somniferum HOM05D002584 ORTHO05D002736 6.0e-18 97.1 146 42.5
Migut.A00681 Erythranthe guttata HOM05D002584 ORTHO05D002736 1.3e-17 95.9 147 39.5
ClCG05G008700 Citrullus lanatus HOM05D002584 ORTHO05D002736 1.7e-17 95.5 150 39.3
Cfa016360 Carpinus fangiana HOM05D002584 ORTHO05D002736 3.9e-17 94.4 142 41.5
Oeu017335.1 Olea europaea HOM05D002584 ORTHO05D002736 1.1e-16 92.8 302 31.8
Actinidia27338 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.5e-16 92.4 152 40.1
PGR142G0759 Punica granatum HOM05D002584 ORTHO05D002736 1.5e-16 92.4 162 37.7
MD07G1284800 Malus domestica HOM05D002584 ORTHO05D002736 1.9e-16 92.0 149 40.3
Ciclev10004699m.g Citrus clementina HOM05D002584 ORTHO05D002736 3.3e-16 91.3 174 36.8
Cfa012844 Carpinus fangiana HOM05D002584 ORTHO05D002736 5.6e-16 90.5 142 40.8
GSVIVG01028743001 Vitis vinifera HOM05D002584 ORTHO05D002736 7.3e-16 90.1 149 39.6
MELO3C026935.2 Cucumis melo HOM05D002584 ORTHO05D002736 1.6e-15 89.0 141 39.7
Sed0015947 Sechium edule HOM05D002584 ORTHO05D002736 1.6e-15 89.0 143 38.5
EL10Ac3g05348 Beta vulgaris HOM05D002584 ORTHO05D002736 2.8e-15 88.2 134 42.5
Haze_00109 Corylus avellana HOM05D002584 ORTHO05D002736 2.8e-15 88.2 100 48.0
Cfa016361 Carpinus fangiana HOM05D002584 ORTHO05D002736 6.2e-15 87.0 291 29.6
Haze_00110 Corylus avellana HOM05D002584 ORTHO05D002736 6.2e-15 87.0 292 31.2
Nitab4.5_0000223g0150 Nicotiana tabacum HOM05D002584 ORTHO05D002736 6.2e-15 87.0 384 27.1
PSO017G4509 Papaver somniferum HOM05D002584 ORTHO05D002736 8.1e-15 86.7 154 39.0
Rhsim07G0084300 Rhododendron simsii HOM05D002584 ORTHO05D002736 1.1e-14 86.3 146 42.5
PSO170G2676 Papaver somniferum HOM05D002584 ORTHO05D002736 1.4e-14 85.9 147 39.5
Haze_08671 Corylus avellana HOM05D002584 ORTHO05D002736 1.8e-14 85.5 142 40.1
Lj1A1012T85 Lonicera japonica HOM05D002584 ORTHO05D002736 1.8e-14 85.5 148 37.8
RcHm_v2.0_Chr1g0380081 Rosa chinensis HOM05D002584 ORTHO05D002736 1.8e-14 85.5 149 36.2
PSO764G0213 Papaver somniferum HOM05D002584 ORTHO05D002736 2.4e-14 85.1 147 38.8
Potri.015G022500 Populus trichocarpa HOM05D002584 ORTHO05D002736 2.4e-14 85.1 100 47.0
Sabra15G0016800 Salix brachista HOM05D002584 ORTHO05D002736 2.4e-14 85.1 100 48.0
Migut.A00683 Erythranthe guttata HOM05D002584 ORTHO05D002736 3.1e-14 84.7 168 36.9
Manes.06G157000 Manihot esculenta HOM05D002584 ORTHO05D002736 3.1e-14 84.7 356 27.2
Peaxi162Scf00074g01214 Petunia axillaris HOM05D002584 ORTHO05D002736 3.1e-14 84.7 180 37.2
PSO063G5339 Papaver somniferum HOM05D002584 ORTHO05D002736 5.3e-14 84.0 146 39.0
Duzib205G0163 Durio zibethinus HOM05D002584 ORTHO05D002736 6.9e-14 83.6 234 34.6
Migut.J00941 Erythranthe guttata HOM05D002584 ORTHO05D002736 6.9e-14 83.6 144 38.2
PSO832G4482 Papaver somniferum HOM05D002584 ORTHO05D002736 6.9e-14 83.6 147 38.8
PSO339G0177 Papaver somniferum HOM05D002584 ORTHO05D002736 9.0e-14 83.2 146 39.7
QL02p031474 Quercus lobata HOM05D002584 ORTHO05D002736 9.0e-14 83.2 129 38.8
CAN.G532.93 Capsicum annuum HOM05D002584 ORTHO05D002736 1.5e-13 82.4 719 23.9
Actinidia22714 Actinidia chinensis HOM05D002584 ORTHO05D002736 2.0e-13 82.0 152 36.8
Actinidia34198 Actinidia chinensis HOM05D002584 ORTHO05D002736 2.6e-13 81.6 166 36.7
AUR62019335 Chenopodium quinoa HOM05D002584 ORTHO05D002736 2.6e-13 81.6 151 37.1
VMungo1309G2151 Vigna mungo HOM05D002584 ORTHO05D002736 2.6e-13 81.6 143 35.0
Phvul.009G137300 Phaseolus vulgaris HOM05D002584 ORTHO05D002736 3.4e-13 81.3 159 35.2
TWI14G1284 Tripterygium wilfordii HOM05D002584 ORTHO05D002736 4.5e-13 80.9 347 28.0
Dinv28338 Davidia involucrata HOM05D002584 ORTHO05D002736 5.8e-13 80.5 149 37.6
Prupe.2G307000 Prunus persica HOM05D002584 ORTHO05D002736 7.6e-13 80.1 345 27.8
Aa31LG3G2620 Aethionema arabicum HOM05D002584 ORTHO05D002736 9.9e-13 79.7 152 36.8
Eucgr.K00328 Eucalyptus grandis HOM05D002584 ORTHO05D002736 9.9e-13 79.7 139 37.4
Oeu060971.1 Olea europaea HOM05D002584 ORTHO05D002736 9.9e-13 79.7 150 38.0
PSO675G6667 Papaver somniferum HOM05D002584 ORTHO05D002736 9.9e-13 79.7 142 38.0
MD01G1215100 Malus domestica HOM05D002584 ORTHO05D002736 1.3e-12 79.3 149 36.9
Manes.01G045600 Manihot esculenta HOM05D002584 ORTHO05D002736 1.3e-12 79.3 307 29.6
PSO675G1901 Papaver somniferum HOM05D002584 ORTHO05D002736 1.7e-12 79.0 142 38.0
CANSAT21G0945 Cannabis sativa HOM05D002584 ORTHO05D002736 2.2e-12 78.6 100 44.0
Nitab4.5_0000473g0110 Nicotiana tabacum HOM05D002584 ORTHO05D002736 2.2e-12 78.6 143 37.1
Nitab4.5_0002589g0030 Nicotiana tabacum HOM05D002584 ORTHO05D002736 2.2e-12 78.6 181 34.3
Lj1g0020480 Lotus japonicus HOM05D002584 ORTHO05D002736 2.9e-12 78.2 364 27.2
PSO675G6647 Papaver somniferum HOM05D002584 ORTHO05D002736 2.9e-12 78.2 158 36.7
PSO591G0115 Papaver somniferum HOM05D002584 ORTHO05D002736 4.9e-12 77.4 255 28.6
Ah.07g206030 Amaranthus hybridus HOM05D002584 ORTHO05D002736 6.4e-12 77.0 148 36.5
PSO591G0137 Papaver somniferum HOM05D002584 ORTHO05D002736 6.4e-12 77.0 150 37.3
Cc02_g01900 Coffea canephora HOM05D002584 ORTHO05D002736 8.4e-12 76.6 256 30.5
Lj1g0015870 Lotus japonicus HOM05D002584 ORTHO05D002736 8.4e-12 76.6 257 29.2
Peaxi162Scf00904g00320 Petunia axillaris HOM05D002584 ORTHO05D002736 8.4e-12 76.6 101 41.6
Hund04830 Selenicereus undatus HOM05D002584 ORTHO05D002736 8.4e-12 76.6 325 28.0
Thecc.03G192600 Theobroma cacao HOM05D002584 ORTHO05D002736 8.4e-12 76.6 178 33.7
CAN.G792.63 Capsicum annuum HOM05D002584 ORTHO05D002736 1.1e-11 76.3 486 26.5
Thhalv10013960m.g Eutrema salsugineum HOM05D002584 ORTHO05D002736 1.1e-11 76.3 140 36.4
PGSC0003DMG400009100 Solanum tuberosum HOM05D002584 ORTHO05D002736 1.1e-11 76.3 270 31.9
CARHR266290 Cardamine hirsuta HOM05D002584 ORTHO05D002736 1.4e-11 75.9 101 41.6
CiPaw.05G257900 Carya illinoinensis HOM05D002584 ORTHO05D002736 1.4e-11 75.9 100 43.0
HanXRQChr09g0253061 Helianthus annuus HOM05D002584 ORTHO05D002736 1.4e-11 75.9 100 42.0
PSO832G1019 Papaver somniferum HOM05D002584 ORTHO05D002736 1.9e-11 75.5 150 36.7
Lalb_Chr08g0240601 Lupinus albus HOM05D002584 ORTHO05D002736 2.4e-11 75.1 100 42.0
PSO832G3317 Papaver somniferum HOM05D002584 ORTHO05D002736 2.4e-11 75.1 147 36.1
PSO764G0332 Papaver somniferum HOM05D002584 ORTHO05D002736 4.2e-11 74.3 146 39.7
Atru.chr1.263 Acer truncatum HOM05D002584 ORTHO05D002736 7.1e-11 73.6 337 26.1
FvH4_7g31000 Fragaria vesca HOM05D002584 ORTHO05D002736 7.1e-11 73.6 347 25.4
QL09p010995 Quercus lobata HOM05D002584 ORTHO05D002736 7.1e-11 73.6 359 27.3
MSTRG.8680 Avicennia marina HOM05D002584 ORTHO05D002736 9.3e-11 73.2 243 29.2
AUR62041778 Chenopodium quinoa HOM05D002584 ORTHO05D002736 9.3e-11 73.2 183 30.6
FAN06G1680 Fragaria x ananassa HOM05D002584 ORTHO05D002736 9.3e-11 73.2 347 26.8
FAN06G3312 Fragaria x ananassa HOM05D002584 ORTHO05D002736 9.3e-11 73.2 347 26.8
ATR1093G048 Amborella trichopoda HOM05D002584 ORTHO05D002736 1.2e-10 72.8 148 35.8
EL10Ac4g09958 Beta vulgaris HOM05D002584 ORTHO05D002736 1.2e-10 72.8 131 36.6
Gorai.008G270900 Gossypium raimondii HOM05D002584 ORTHO05D002736 1.2e-10 72.8 198 32.3
Solyc03g007420.3 Solanum lycopersicum HOM05D002584 ORTHO05D002736 1.2e-10 72.8 261 30.7
Sp6g15400 Schrenkiella parvula HOM05D002584 ORTHO05D002736 2.1e-10 72.0 101 41.6
A03p15280 Brassica napus HOM05D002584 ORTHO05D002736 2.7e-10 71.6 101 40.6
BraA03t10821Z Brassica rapa HOM05D002584 ORTHO05D002736 2.7e-10 71.6 101 40.6
Gohir.D12G252800 Gossypium hirsutum HOM05D002584 ORTHO05D002736 2.7e-10 71.6 198 32.8
Gohir.D12G253600 Gossypium hirsutum HOM05D002584 ORTHO05D002736 2.7e-10 71.6 198 32.8
PSO017G1735 Papaver somniferum HOM05D002584 ORTHO05D002736 2.7e-10 71.6 153 33.3
PSO017G6345 Papaver somniferum HOM05D002584 ORTHO05D002736 2.7e-10 71.6 102 45.1
PSO421G0489 Papaver somniferum HOM05D002584 ORTHO05D002736 2.7e-10 71.6 104 41.3
Potri.014G039200 Populus trichocarpa HOM05D002584 ORTHO05D002736 2.7e-10 71.6 309 29.1
FAN10G3352 Fragaria x ananassa HOM05D002584 ORTHO05D002736 3.5e-10 71.2 437 25.4
FAN10G3419 Fragaria x ananassa HOM05D002584 ORTHO05D002736 3.5e-10 71.2 437 25.4
PSO732G0710 Papaver somniferum HOM05D002584 ORTHO05D002736 4.6e-10 70.9 100 43.0
Sabra14G0028500 Salix brachista HOM05D002584 ORTHO05D002736 6.0e-10 70.5 304 28.3
AUR62006155 Chenopodium quinoa HOM05D002584 ORTHO05D002736 7.9e-10 70.1 152 34.2
Gohir.A12G251900 Gossypium hirsutum HOM05D002584 ORTHO05D002736 7.9e-10 70.1 242 31.0
PSO063G5830 Papaver somniferum HOM05D002584 ORTHO05D002736 7.9e-10 70.1 151 33.8
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea HOM05D002584 ORTHO05D002736 1.0e-09 69.7 230 32.2
BcaB01g04236 Brassica carinata HOM05D002584 ORTHO05D002736 1.0e-09 69.7 153 35.3
Nn3g19082 Nelumbo nucifera HOM05D002584 ORTHO05D002736 1.0e-09 69.7 768 22.5
Actinidia08626 Actinidia chinensis HOM05D002584 ORTHO05D002736 1.3e-09 69.3 163 33.7
FAN01G3133 Fragaria x ananassa HOM05D002584 ORTHO05D002736 1.3e-09 69.3 428 26.6
AT5G53220 Arabidopsis thaliana HOM05D002584 ORTHO05D002736 1.8e-09 68.9 129 34.1
Atru.chr9.2048 Acer truncatum HOM05D002584 ORTHO05D002736 2.3e-09 68.6 102 39.2
Migut.F00244 Erythranthe guttata HOM05D002584 ORTHO05D002736 2.3e-09 68.6 94 40.4
Eucgr.E00841 Eucalyptus grandis HOM05D002584 ORTHO05D002736 2.3e-09 68.6 99 39.4
PSO782G5749 Papaver somniferum HOM05D002584 ORTHO05D002736 2.3e-09 68.6 166 33.7
SalBow4G3348 Salvia bowleyana HOM05D002584 ORTHO05D002736 3.0e-09 68.2 253 26.9
Sopen03g003380 Solanum pennellii HOM05D002584 ORTHO05D002736 3.0e-09 68.2 393 26.7
AL8G27880 Arabidopsis lyrata HOM05D002584 ORTHO05D002736 3.9e-09 67.8 144 34.0
BcaC01g06231 Brassica carinata HOM05D002584 ORTHO05D002736 3.9e-09 67.8 150 32.0
C03p17860 Brassica napus HOM05D002584 ORTHO05D002736 3.9e-09 67.8 150 32.0
BolC3t14193H Brassica oleracea HOM05D002584 ORTHO05D002736 3.9e-09 67.8 150 32.0
COL.COLO4_35658 Corchorus olitorius HOM05D002584 ORTHO05D002736 3.9e-09 67.8 246 30.5
Aqoxy7G01617 Aquilegia oxysepala HOM05D002584 ORTHO05D002736 5.1e-09 67.4 101 39.6
PSO675G0694 Papaver somniferum HOM05D002584 ORTHO05D002736 5.1e-09 67.4 149 36.2
PSO732G0732 Papaver somniferum HOM05D002584 ORTHO05D002736 5.1e-09 67.4 155 31.0
Zm00001eb119710 Zea mays HOM05D002584 ORTHO05D002736 5.1e-09 67.4 135 33.3
HanXRQChr09g0253091 Helianthus annuus HOM05D002584 ORTHO05D002736 8.7e-09 66.6 238 30.3
Rhsim03G0198700 Rhododendron simsii HOM05D002584 ORTHO05D002736 8.7e-09 66.6 251 28.3
HanXRQChr09g0253081 Helianthus annuus HOM05D002584 ORTHO05D002736 1.1e-08 66.2 171 34.5
Os01g0221300 Oryza sativa ssp. japonica HOM05D002584 ORTHO05D002736 1.1e-08 66.2 145 31.7
vmacro06576 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 1.5e-08 65.9 326 29.4
SGA_v2.0_scaffold192G40581 Striga asiatica HOM05D002584 ORTHO05D002736 1.9e-08 65.5 146 30.8
DCAR_005024 Daucus carota HOM05D002584 ORTHO05D002736 2.5e-08 65.1 243 25.5
PSO210G0413 Papaver somniferum HOM05D002584 ORTHO05D002736 2.5e-08 65.1 101 36.6
Hma1.2p1_0952F.1_g240875 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 3.3e-08 64.7 54 57.4
Hma1.2p1_0952F.1_g240890 Hydrangea macrophylla HOM05D002584 ORTHO05D002736 3.3e-08 64.7 54 57.4
ECA232G0187 Erigeron canadensis HOM05D002584 ORTHO05D002736 4.3e-08 64.3 102 36.3
Medtr1g028880 Medicago truncatula HOM05D002584 ORTHO05D002736 4.3e-08 64.3 100 39.0
PSO732G0573 Papaver somniferum HOM05D002584 ORTHO05D002736 5.6e-08 63.9 263 27.4
Sc01g0004580 Simmondsia chinensis HOM05D002584 ORTHO05D002736 9.6e-08 63.2 90 41.1
Lsat_1_v5_gn_9_57421 Lactuca sativa HOM05D002584 ORTHO05D002736 1.3e-07 62.8 94 39.4
PSO675G1890 Papaver somniferum HOM05D002584 ORTHO05D002736 1.6e-07 62.4 189 27.5
Medtr1g028620 Medicago truncatula HOM05D002584 ORTHO05D002736 2.8e-07 61.6 99 37.4
SGA_v2.0_scaffold97G29144 Striga asiatica HOM05D035903 ORTHO05D002736 2.8e-07 61.6 151 31.1
ClCG07G014870 Citrullus lanatus HOM05D002584 ORTHO05D002736 3.6e-07 61.2 166 31.3
CsaV3_4G006400 Cucumis sativus L. HOM05D002584 ORTHO05D002736 3.6e-07 61.2 93 40.9
MBI06_g22400_MAGBIO Magnolia biondii HOM05D002584 ORTHO05D002736 3.6e-07 61.2 783 22.0
Peaxi162Scf00074g00127 Petunia axillaris HOM05D001220 ORTHO05D000110 4.8e-07 60.8 89 39.3
Nitab4.5_0004161g0010 Nicotiana tabacum HOM05D002584 ORTHO05D002736 6.2e-07 60.5 357 24.9
CAN.G792.48 Capsicum annuum HOM05D002584 ORTHO05D002736 8.1e-07 60.1 98 40.8
PSO170G4022 Papaver somniferum HOM05D002584 ORTHO05D002736 8.1e-07 60.1 169 30.8
PSO210G0379 Papaver somniferum HOM05D002584 ORTHO05D002736 8.1e-07 60.1 169 30.8
Sed0013734 Sechium edule HOM05D002584 ORTHO05D002736 8.1e-07 60.1 129 31.0
PSO017G5210 Papaver somniferum HOM05D002584 ORTHO05D002736 1.1e-06 59.7 281 26.3
PSO478G0802 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-06 58.2 281 26.0
PSO675G5115 Papaver somniferum HOM05D002584 ORTHO05D002736 3.1e-06 58.2 309 26.5
vmacro13916 Vaccinium macrocarpon HOM05D002584 ORTHO05D002736 3.1e-06 58.2 136 36.8
MELO3C016311.2 Cucumis melo HOM05D002584 ORTHO05D002736 4.0e-06 57.8 102 36.3
EL10Ac5g12881 Beta vulgaris HOM05D002584 ORTHO05D002736 6.9e-06 57.0 103 31.1


User provided reference genes

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