Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 1.4e-104 382.9 189 100.0
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 2.7e-90 335.5 188 87.8
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 1.4e-86 323.2 187 84.0
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 3.4e-85 318.5 189 82.5
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 6.6e-81 304.3 186 81.7
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 2.8e-79 298.9 186 80.1
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 3.0e-78 295.4 189 77.2
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 3.4e-77 292.0 189 73.5
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 5.7e-77 291.2 190 75.3
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 2.8e-76 288.9 194 73.2
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 8.3e-76 287.3 189 74.6
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 8.3e-76 287.3 190 74.7
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 8.3e-76 287.3 186 76.3
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 1.1e-75 287.0 191 73.8
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 1.8e-75 286.2 192 73.4
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 3.1e-75 285.4 191 74.3
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 3.1e-75 285.4 194 73.2
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 4.1e-75 285.0 188 71.8
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 5.4e-75 284.6 188 73.9
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 5.4e-75 284.6 188 76.6
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 7.0e-75 284.3 191 73.8
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 9.2e-75 283.9 191 74.3
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.2e-74 283.5 188 71.3
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 1.2e-74 283.5 198 71.2
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 1.0e-73 280.4 189 73.5
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.3e-73 280.0 189 73.0
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 1.3e-73 280.0 195 71.3
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 3.8e-73 278.5 195 71.3
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 3.8e-73 278.5 192 71.9
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.8e-73 278.5 195 71.8
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 3.8e-73 278.5 198 70.7
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 3.8e-73 278.5 198 70.7
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 5.0e-73 278.1 185 74.1
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 6.6e-73 277.7 191 70.7
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 1.1e-72 276.9 197 70.6
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 1.1e-72 276.9 189 72.0
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 3.3e-72 275.4 192 71.4
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 4.3e-72 275.0 198 71.2
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 7.3e-72 274.2 187 71.7
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 1.2e-71 273.5 189 71.4
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 1.6e-71 273.1 199 70.9
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 1.4e-70 270.0 224 62.9
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 1.4e-70 270.0 190 71.6
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 2.3e-70 269.2 190 71.1
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 3.1e-70 268.9 199 69.8
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.2e-69 266.9 192 70.3
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 1.2e-69 266.9 190 71.1
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 1.2e-69 266.9 190 71.1
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 3.4e-69 265.4 186 69.9
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 4.4e-69 265.0 191 70.7
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 9.8e-69 263.8 188 68.6
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.3e-68 263.5 192 67.2
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 2.9e-68 262.3 192 69.8
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 8.3e-68 260.8 195 66.2
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 1.9e-67 259.6 194 69.6
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 4.1e-67 258.5 192 64.1
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 4.1e-67 258.5 192 64.1
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 7.0e-67 257.7 192 64.1
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 1.2e-66 256.9 192 63.5
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 1.6e-66 256.5 186 67.7
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 1.6e-66 256.5 192 68.2
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 1.6e-66 256.5 195 63.6
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 2.7e-66 255.8 192 63.5
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 3.5e-66 255.4 191 68.6
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 3.5e-66 255.4 229 58.5
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 4.6e-66 255.0 186 70.4
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 7.8e-66 254.2 194 66.5
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 7.8e-66 254.2 194 66.5
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 7.8e-66 254.2 192 66.7
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 2.3e-65 252.7 182 71.4
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 3.0e-65 252.3 193 66.8
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 5.0e-65 251.5 192 63.0
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 6.6e-65 251.1 196 62.2
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 6.6e-65 251.1 195 66.7
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 1.5e-64 250.0 192 62.0
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 1.9e-64 249.6 193 65.3
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 3.3e-64 248.8 204 64.7
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 5.6e-64 248.1 192 62.0
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 5.6e-64 248.1 192 64.1
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.2e-63 246.9 195 62.1
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 1.6e-63 246.5 192 62.0
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 8.9e-62 240.7 192 61.5
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 4.4e-61 238.4 187 65.2
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 7.5e-61 237.7 187 64.2
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 2.9e-60 235.7 187 62.0
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 2.9e-60 235.7 194 60.8
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 3.7e-60 235.3 177 66.1
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 6.4e-60 234.6 191 61.3
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.1e-59 233.8 191 63.9
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.9e-59 233.0 191 63.4
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 7.0e-59 231.1 191 64.4
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 6.0e-58 228.0 275 47.6
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 6.6e-57 224.6 186 64.0
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.1e-56 223.8 186 63.4
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 1.6e-55 219.9 152 71.7
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 3.6e-55 218.8 179 61.5
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 1.4e-54 216.9 191 61.8
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 1.5e-53 213.4 183 59.6
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 5.8e-53 211.5 186 59.1
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 7.5e-53 211.1 185 58.9
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 3.7e-52 208.8 186 59.7
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 3.7e-52 208.8 184 57.1
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 4.9e-52 208.4 185 58.4
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 8.3e-52 207.6 185 60.5
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 3.2e-51 205.7 186 57.5
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 1.9e-43 179.9 154 56.5
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 1.5e-37 160.2 113 71.7
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 8.4e-36 154.5 180 48.9
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 2.3e-33 146.4 179 43.0
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 1.9e-32 143.3 111 68.5
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 9.9e-29 131.0 110 61.8
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 1.0e-25 120.9 179 40.8
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 9.6e-24 114.4 115 55.7
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 4.3e-16 89.0 54 72.2
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.8e-14 83.6 49 79.6
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 3.1e-14 82.8 184 34.2
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 2.9e-12 76.3 77 49.4
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 5.1e-09 65.5 59 61.0
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 6.7e-09 65.1 35 80.0
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 2.5e-08 63.2 199 29.6


User provided reference genes

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