Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 2.1e-203 712.2 372 100.0
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 8.6e-101 371.3 363 59.0
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 2.3e-77 293.5 350 49.1
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.7e-51 206.5 364 35.7
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 3.4e-49 199.9 411 33.1
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 7.6e-49 198.7 364 36.5
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 1.1e-47 194.9 382 34.8
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 5.5e-47 192.6 347 34.9
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 1.3e-43 181.4 320 35.6
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 6.3e-43 179.1 324 36.4
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 2.4e-42 177.2 384 33.1
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 3.1e-42 176.8 382 33.0
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 7.6e-41 172.2 315 35.6
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 6.5e-40 169.1 302 39.4
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 1.1e-39 168.3 343 32.7
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 2.5e-39 167.2 302 36.1
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 5.5e-39 166.0 238 38.7
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.6e-38 163.3 320 33.4
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 6.1e-38 162.5 318 35.5
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 5.1e-37 159.5 399 31.1
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 8.7e-37 158.7 320 32.2
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 1.9e-36 157.5 338 34.3
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 3.3e-36 156.8 351 31.6
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 2.2e-35 154.1 400 30.5
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 2.6e-33 147.1 280 32.5
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 5.9e-33 146.0 289 31.5
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 1.0e-29 135.2 284 33.1
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 8.8e-29 132.1 367 28.9
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 9.1e-26 122.1 312 26.6
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 9.1e-26 122.1 162 40.1
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 1.7e-24 117.9 194 34.5
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.7e-24 117.9 187 35.3
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.7e-24 117.9 184 34.8
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.7e-24 117.9 184 34.8
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 2.2e-24 117.5 187 34.2
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 8.5e-24 115.5 166 36.1
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 8.5e-24 115.5 180 38.3
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 9.4e-23 112.1 163 36.2
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 3.3e-20 103.6 201 33.8
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 6.3e-19 99.4 309 27.2
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.8e-18 97.8 215 28.4
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 4.5e-17 93.2 132 40.2
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 1.0e-16 92.0 132 37.1
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 3.8e-16 90.1 132 36.4
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 6.5e-16 89.4 138 35.5
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 1.5e-15 88.2 138 35.5
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 4.2e-15 86.7 138 34.8
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 5.5e-15 86.3 138 34.1
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 6.1e-14 82.8 132 37.1
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 6.1e-14 82.8 151 32.5
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 8.0e-14 82.4 132 34.8
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 8.0e-14 82.4 141 34.8
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 1.0e-13 82.0 138 33.3
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 4.4e-12 76.6 113 38.1
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 7.0e-10 69.3 149 29.5
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 5.0e-08 63.2 147 30.6
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 3.2e-07 60.5 146 25.3
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 1.2e-06 58.5 149 26.8
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 1.2e-06 58.5 151 27.2


User provided reference genes

Program Settings