Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.8e-69 265.8 130 100.0
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 2.0e-52 209.1 133 78.2
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.2e-51 205.7 130 73.8
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 6.3e-51 204.1 128 76.6
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 2.4e-50 202.2 123 78.0
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 1.2e-49 199.9 130 74.6
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 2.7e-49 198.7 125 76.8
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 5.9e-49 197.6 131 74.8
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.7e-48 196.1 130 73.8
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 5.0e-48 194.5 122 76.2
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 8.6e-48 193.7 124 73.4
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 1.5e-47 193.0 118 73.7
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.9e-47 192.6 130 74.6
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.5e-47 192.2 119 76.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.5e-47 192.2 130 71.5
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 3.3e-47 191.8 129 69.0
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 7.3e-47 190.7 135 70.4
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 9.5e-47 190.3 121 76.0
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 9.5e-47 190.3 122 76.2
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.6e-46 189.5 122 75.4
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.6e-46 189.5 122 73.0
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.1e-46 189.1 119 72.3
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.1e-46 189.1 123 71.5
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 2.8e-46 188.7 130 69.2
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 3.6e-46 188.3 124 67.7
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 4.7e-46 188.0 115 73.0
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 4.7e-46 188.0 119 73.9
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 6.1e-46 187.6 118 74.6
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.0e-45 186.8 119 74.8
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.0e-45 186.8 119 70.6
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.0e-45 186.8 130 73.1
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 1.4e-45 186.4 115 72.2
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.4e-45 186.4 123 73.2
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.4e-45 186.4 119 73.9
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.8e-45 186.0 119 74.8
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.8e-45 186.0 120 71.7
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 2.3e-45 185.7 117 70.9
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 2.3e-45 185.7 117 70.9
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 2.3e-45 185.7 117 70.9
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 2.3e-45 185.7 117 70.9
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.1e-45 185.3 121 72.7
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 3.1e-45 185.3 118 75.4
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 4.0e-45 184.9 125 72.8
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 6.8e-45 184.1 121 71.9
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 8.9e-45 183.7 119 68.1
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 8.9e-45 183.7 119 72.3
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.2e-44 183.3 130 67.7
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.2e-44 183.3 118 76.3
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.5e-44 183.0 130 69.2
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 2.0e-44 182.6 117 72.6
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.6e-44 182.2 119 73.1
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 4.4e-44 181.4 119 68.1
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 4.4e-44 181.4 119 73.1
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 7.5e-44 180.6 119 72.3
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.7e-43 179.5 128 67.2
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.7e-43 179.5 117 71.8
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 1.7e-43 179.5 121 73.6
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 2.2e-43 179.1 125 70.4
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.9e-43 178.7 119 70.6
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.4e-43 177.6 129 67.4
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.1e-42 176.8 130 64.6
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.1e-42 176.8 125 69.6
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 1.4e-42 176.4 119 66.4
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 1.4e-42 176.4 119 70.6
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.4e-42 176.4 119 68.9
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.4e-42 176.4 122 68.9
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 3.2e-42 175.3 126 67.5
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 4.1e-42 174.9 117 70.1
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.7e-41 172.2 119 72.3
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 3.5e-41 171.8 128 68.0
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.6e-41 171.4 140 61.4
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 3.9e-40 168.3 122 68.9
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 6.6e-40 167.5 119 65.5
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 8.6e-40 167.2 103 77.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 4.3e-39 164.9 119 65.5
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.6e-38 162.9 156 55.8
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 3.6e-38 161.8 122 62.3
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 1.4e-37 159.8 117 65.0
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 6.8e-37 157.5 130 60.8
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.9e-35 152.1 114 64.0
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 1.4e-34 149.8 101 70.3
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.0e-34 147.5 100 72.0
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.1e-31 140.2 130 55.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 3.3e-31 138.7 79 83.5
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.3e-29 132.5 80 77.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.1e-26 120.9 80 72.5
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.2e-22 110.2 110 49.1
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 6.2e-22 107.8 111 47.7
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 8.1e-22 107.5 83 65.1
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 2.4e-21 105.9 59 79.7
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 3.1e-21 105.5 85 61.2
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 7.8e-17 90.9 104 46.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 5.6e-15 84.7 90 50.0
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 4.4e-12 75.1 102 41.2
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.3e-08 62.8 51 56.9


User provided reference genes

Program Settings