Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 3.0e-125 451.8 224 100.0
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 2.7e-49 199.5 158 65.2
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 3.5e-49 199.1 139 75.5
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 9.6e-47 191.0 146 67.8
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 5.3e-45 185.3 148 67.6
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 4.4e-44 182.2 138 69.6
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 3.8e-43 179.1 138 68.1
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 1.4e-42 177.2 131 70.2
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.6e-41 173.7 137 66.4
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 4.6e-41 172.2 138 65.2
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 6.0e-41 171.8 134 64.9
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 1.3e-40 170.6 137 65.7
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 1.7e-40 170.2 168 58.3
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 1.7e-40 170.2 168 58.3
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 5.1e-40 168.7 193 50.3
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 8.7e-40 167.9 119 71.4
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 8.7e-40 167.9 111 73.9
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 9.6e-39 164.5 107 73.8
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 1.6e-38 163.7 130 63.8
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.6e-38 163.7 112 72.3
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 1.6e-38 163.7 106 74.5
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 2.8e-38 162.9 112 72.3
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.6e-38 162.5 110 72.7
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 4.8e-38 162.2 138 62.3
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 6.2e-38 161.8 126 64.3
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 6.2e-38 161.8 116 72.4
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 1.4e-37 160.6 107 73.8
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 1.8e-37 160.2 119 67.2
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 2.4e-37 159.8 105 74.3
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 2.4e-37 159.8 132 59.8
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 3.1e-37 159.5 118 67.8
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 4.0e-37 159.1 105 74.3
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 5.3e-37 158.7 107 71.0
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 6.9e-37 158.3 122 63.9
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 9.0e-37 157.9 133 60.2
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 9.0e-37 157.9 133 60.2
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 9.0e-37 157.9 116 70.7
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 1.5e-36 157.1 114 66.7
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.5e-36 157.1 122 63.1
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 1.5e-36 157.1 122 63.1
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 1.5e-36 157.1 110 70.9
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 2.0e-36 156.8 114 66.7
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 2.0e-36 156.8 117 67.5
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 3.4e-36 156.0 105 71.4
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 3.4e-36 156.0 105 71.4
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 3.4e-36 156.0 136 61.8
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 3.4e-36 156.0 114 68.4
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 4.5e-36 155.6 134 60.4
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 4.5e-36 155.6 133 62.4
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 4.5e-36 155.6 105 74.3
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 5.8e-36 155.2 116 68.1
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 7.6e-36 154.8 167 53.3
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 7.6e-36 154.8 106 69.8
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 1.3e-35 154.1 106 69.8
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.3e-35 154.1 126 61.1
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 1.3e-35 154.1 130 58.5
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 2.2e-35 153.3 105 69.5
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 2.2e-35 153.3 89 80.9
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 2.2e-35 153.3 103 72.8
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 3.8e-35 152.5 126 62.7
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 6.4e-35 151.8 117 64.1
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 6.4e-35 151.8 114 67.5
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 8.4e-35 151.4 117 65.8
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 8.4e-35 151.4 117 65.8
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.1e-34 151.0 89 79.8
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 1.1e-34 151.0 104 72.1
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 1.1e-34 151.0 136 57.4
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 1.1e-34 151.0 124 62.1
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 2.4e-34 149.8 114 66.7
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 3.2e-34 149.4 104 70.2
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 7.1e-34 148.3 135 59.3
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 7.1e-34 148.3 114 64.0
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 9.3e-34 147.9 114 65.8
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 1.6e-33 147.1 104 69.2
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 1.6e-33 147.1 105 69.5
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 2.7e-33 146.4 124 61.3
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 6.0e-33 145.2 136 55.9
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 7.9e-33 144.8 102 67.6
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 1.0e-32 144.4 90 74.4
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 1.3e-32 144.1 168 48.8
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 1.8e-32 143.7 91 71.4
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 2.3e-32 143.3 110 62.7
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 5.1e-32 142.1 107 62.6
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 8.7e-32 141.4 98 71.4
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 3.3e-31 139.4 108 64.8
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 4.3e-31 139.0 105 66.7
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 7.4e-31 138.3 107 61.7
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 9.6e-31 137.9 113 61.1
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 9.6e-31 137.9 80 80.0
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 9.6e-31 137.9 92 75.0
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 1.6e-30 137.1 101 67.3
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 4.0e-29 132.5 106 63.2
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 2.2e-27 126.7 158 48.1
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 8.4e-27 124.8 104 56.7
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.4e-26 124.0 96 65.6
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 2.5e-26 123.2 103 56.3
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 3.2e-26 122.9 98 65.3
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 7.1e-26 121.7 107 54.2
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 9.3e-26 121.3 83 68.7
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 3.7e-22 109.4 80 65.0
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 3.1e-21 106.3 89 57.3
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 5.0e-19 99.0 78 65.4
BolC4t24505H Brassica oleracea HOM05D006745 ORTHO05D008449 3.6e-17 92.8 118 48.3
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 1.5e-15 87.4 92 53.3
Glyma.11G080201 Glycine max HOM05D006745 ORTHO05D008449 3.3e-15 86.3 60 68.3
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 4.8e-14 82.4 60 63.3
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 1.4e-13 80.9 134 43.3
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 1.0e-11 74.7 102 43.1
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 2.2e-11 73.6 57 66.7
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 3.8e-11 72.8 76 53.9
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 4.4e-07 59.3 39 69.2
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 2.8e-06 56.6 152 32.2
SEGI_27117 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 3.7e-06 56.2 73 45.2
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 8.2e-06 55.1 91 36.3


User provided reference genes

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