Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 2.6e-112 408.7 203 100.0
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.2e-77 293.5 177 80.2
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 5.1e-71 271.6 157 84.1
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.9e-70 269.6 175 77.7
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 4.1e-65 251.9 188 67.0
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 4.1e-65 251.9 178 72.5
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 7.1e-65 251.1 197 67.5
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.3e-63 246.9 163 74.2
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 8.6e-63 244.2 182 67.6
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.9e-62 243.0 184 66.8
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 3.6e-61 238.8 151 76.2
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 8.9e-60 234.2 153 75.2
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 4.9e-58 228.4 162 69.8
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 8.4e-58 227.6 165 69.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 5.4e-57 224.9 161 68.3
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 5.4e-57 224.9 186 64.5
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 9.3e-57 224.2 187 64.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.2e-56 223.8 188 63.8
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 1.6e-56 223.4 156 69.2
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.1e-56 223.0 185 63.8
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 6.0e-56 221.5 164 69.5
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 1.7e-55 219.9 160 70.0
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.3e-55 219.5 158 68.4
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.1e-54 217.2 158 67.1
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.1e-54 217.2 157 66.9
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.9e-54 216.5 181 62.4
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 5.6e-54 214.9 153 71.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 7.3e-54 214.5 161 66.5
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.3e-53 213.8 158 66.5
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.3e-53 213.8 158 67.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 8.1e-53 211.1 155 64.5
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.8e-52 209.9 157 64.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.8e-52 209.9 157 64.3
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 2.4e-52 209.5 200 58.0
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.1e-52 209.1 156 66.0
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 4.0e-52 208.8 150 66.0
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 5.3e-52 208.4 159 64.8
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 9.0e-52 207.6 156 65.4
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 9.0e-52 207.6 155 67.1
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.6e-51 206.1 161 61.5
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 9.9e-51 204.1 168 64.3
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.7e-50 203.4 155 65.8
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.9e-49 199.9 171 60.2
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 7.1e-49 198.0 157 63.1
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.7e-48 196.1 159 62.3
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.0e-48 194.9 154 65.6
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 6.0e-48 194.9 154 65.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 4.3e-46 188.7 152 61.2
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 6.2e-45 184.9 157 56.7
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.1e-44 184.1 153 60.1
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.4e-44 183.7 151 59.6
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 2.6e-43 179.5 144 63.9
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.7e-42 176.8 157 55.4
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 4.9e-42 175.3 166 50.6
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.1e-41 174.1 148 56.8
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.9e-41 173.3 169 53.8
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 2.4e-41 172.9 157 54.8
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 2.4e-41 172.9 156 54.5
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 7.1e-41 171.4 181 48.6
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 9.3e-41 171.0 185 50.3
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.6e-40 170.2 176 51.1
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 4.6e-40 168.7 169 52.7
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 6.0e-40 168.3 130 61.5
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 8.7e-39 164.5 176 50.6
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.5e-38 162.9 152 53.3
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.3e-38 162.5 156 52.6
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 8.1e-37 157.9 165 50.3
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.8e-36 156.8 115 67.0
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.8e-36 156.8 169 49.7
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.8e-36 156.8 164 53.0
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 2.4e-36 156.4 145 54.5
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.5e-35 153.7 149 54.4
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.6e-35 152.9 149 54.4
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-35 152.9 157 49.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 5.8e-35 151.8 97 76.3
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 7.6e-35 151.4 152 53.9
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.3e-34 150.6 155 51.0
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.3e-34 150.6 155 51.0
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 1.7e-34 150.2 154 51.3
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 2.9e-34 149.4 149 52.3
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.9e-34 149.4 152 53.3
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.9e-34 149.4 152 53.3
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 4.9e-34 148.7 159 49.7
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 4.9e-34 148.7 149 55.0
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 6.5e-34 148.3 150 52.7
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.9e-33 146.7 160 49.4
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 2.3e-31 139.8 137 53.3
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 8.7e-31 137.9 135 57.8
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 2.5e-30 136.3 137 48.9
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 5.7e-30 135.2 148 47.3
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 9.6e-30 134.4 148 44.6
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.7e-29 132.5 148 46.6
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 1.2e-27 127.5 154 44.8
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.4e-20 103.2 113 49.6
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 6.9e-20 101.7 106 48.1
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.2e-19 100.9 84 60.7
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 5.0e-18 95.5 130 38.5
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 2.1e-16 90.1 99 44.4
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.4e-15 87.4 69 62.3
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 3.0e-15 86.3 90 48.9
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.5e-11 73.9 44 79.5
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.7e-08 62.4 57 47.4


User provided reference genes

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