Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 1.3e-86 323.2 177 100.0
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.3e-50 201.8 179 68.2
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 9.9e-47 190.7 177 68.4
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 5.4e-45 184.9 168 66.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 9.6e-42 174.1 179 59.8
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 9.0e-40 167.5 168 62.5
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 4.2e-37 158.7 177 57.1
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 2.3e-35 152.9 177 52.5
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.0e-35 152.5 173 56.1
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.5e-34 150.2 176 54.5
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 5.6e-34 148.3 158 60.8
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 6.2e-33 144.8 172 54.1
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 1.4e-32 143.7 164 51.2
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.7e-30 136.7 177 52.5
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.2e-30 136.3 172 53.5
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 2.9e-30 136.0 177 54.8
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.1e-29 134.0 168 54.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 2.4e-29 132.9 177 52.0
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 2.4e-29 132.9 168 50.0
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 7.1e-29 131.3 109 73.4
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 1.6e-28 130.2 176 50.0
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 1.6e-28 130.2 163 57.1
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 2.1e-28 129.8 177 52.5
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 3.5e-28 129.0 160 52.5
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.0e-27 127.5 158 53.2
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.0e-27 127.5 162 53.1
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 1.3e-27 127.1 168 53.6
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 3.0e-27 125.9 169 51.5
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 3.9e-27 125.6 177 50.3
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 5.1e-27 125.2 118 67.8
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 6.7e-27 124.8 169 49.1
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 8.7e-27 124.4 179 49.7
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 2.5e-26 122.9 177 49.2
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.5e-26 122.9 169 50.3
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 3.3e-26 122.5 142 57.7
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 4.3e-26 122.1 142 58.5
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 1.3e-25 120.6 109 70.6
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.6e-25 120.2 169 50.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.1e-25 119.8 177 50.3
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-25 119.8 177 50.3
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-25 119.8 177 50.3
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.1e-25 119.8 168 49.4
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 3.7e-25 119.0 177 45.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 3.7e-25 119.0 177 45.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.8e-25 118.6 130 59.2
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 1.1e-24 117.5 177 45.2
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.8e-24 116.7 143 58.7
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.4e-24 116.3 142 56.3
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 3.1e-24 115.9 142 55.6
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 4.0e-24 115.5 143 58.0
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 4.0e-24 115.5 110 70.0
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 4.0e-24 115.5 131 62.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 4.0e-24 115.5 168 50.0
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 6.9e-24 114.8 143 58.0
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 9.0e-24 114.4 143 57.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.5e-23 113.6 152 52.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.0e-23 113.2 142 56.3
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.0e-23 113.2 149 54.4
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 3.4e-23 112.5 143 55.9
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 4.5e-23 112.1 169 49.1
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 4.5e-23 112.1 168 49.4
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 7.6e-23 111.3 112 66.1
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.3e-22 110.5 170 47.6
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.3e-22 110.5 162 50.6
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 1.7e-22 110.2 142 52.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.2e-22 109.8 112 66.1
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.2e-22 109.8 168 48.8
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.2e-22 109.8 168 46.4
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.9e-22 108.6 96 74.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.5e-22 108.2 141 55.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.1e-21 107.5 96 72.9
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.9e-21 106.7 86 82.6
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.9e-21 106.7 96 72.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.9e-21 106.7 173 49.1
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 2.5e-21 106.3 173 49.1
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 4.2e-21 105.5 81 81.5
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 5.5e-21 105.1 172 48.8
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 9.3e-21 104.4 178 44.4
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.2e-20 104.0 79 82.3
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 2.1e-20 103.2 97 70.1
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 2.7e-20 102.8 97 69.1
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.7e-20 102.8 185 47.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 4.6e-20 102.1 141 52.5
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 6.0e-20 101.7 109 62.4
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 1.3e-19 100.5 82 78.0
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 1.3e-19 100.5 79 82.3
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.0e-19 99.4 109 58.7
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 3.9e-19 99.0 141 50.4
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 3.9e-19 99.0 141 52.5
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 3.9e-19 99.0 141 52.5
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 5.1e-19 98.6 79 78.5
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 1.1e-18 97.4 98 64.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 7.4e-18 94.7 92 73.9
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 9.6e-18 94.4 78 82.1
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.3e-17 94.0 89 69.7
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.8e-17 92.8 176 44.9
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 2.8e-17 92.8 130 55.4
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 4.8e-17 92.0 160 43.8
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 3.8e-14 82.4 95 60.0
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.5e-14 81.6 93 61.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.1e-13 80.9 94 56.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.9e-13 80.1 83 67.5
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 1.3e-11 73.9 74 56.8


User provided reference genes

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