Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 4.0e-194 681.4 381 100.0
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 1.7e-136 490.0 382 69.1
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 3.3e-124 449.1 384 66.7
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 1.5e-116 423.7 381 65.4
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 1.5e-116 423.7 383 61.1
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 7.4e-116 421.4 381 62.2
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 3.7e-115 419.1 382 65.2
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 4.1e-114 415.6 391 61.4
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 1.5e-113 413.7 390 60.3
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 3.2e-111 406.0 393 59.0
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 1.2e-110 404.1 382 58.9
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 1.2e-110 404.1 381 61.9
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 1.4e-109 400.6 380 61.3
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 1.4e-109 400.6 379 61.5
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 1.8e-109 400.2 379 60.4
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 6.7e-109 398.3 403 57.6
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 1.1e-108 397.5 379 60.7
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 2.0e-108 396.7 361 62.9
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 1.3e-107 394.0 403 59.8
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 1.3e-107 394.0 391 58.1
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 3.7e-107 392.5 383 60.8
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 4.8e-107 392.1 384 60.9
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 3.1e-106 389.4 388 56.7
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 4.1e-106 389.0 389 57.8
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 7.0e-106 388.3 389 57.6
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 9.1e-106 387.9 393 57.8
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 5.9e-105 385.2 381 60.1
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 7.7e-105 384.8 386 57.3
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 1.0e-104 384.4 386 58.8
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 2.9e-104 382.9 355 63.4
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.1e-103 380.9 397 56.7
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 1.1e-103 380.9 386 58.8
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 1.4e-103 380.6 387 57.1
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 1.6e-102 377.1 358 62.3
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 2.1e-102 376.7 384 58.6
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 2.7e-102 376.3 390 57.4
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 8.0e-102 374.8 617 42.8
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 3.9e-101 372.5 366 57.9
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 5.2e-101 372.1 402 56.0
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 6.7e-101 371.7 446 54.0
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 8.8e-101 371.3 378 57.4
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 4.4e-100 369.0 395 57.7
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 5.7e-100 368.6 421 51.8
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 5.7e-100 368.6 381 55.9
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 2.2e-99 366.7 393 53.9
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.1e-98 364.4 367 54.8
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 1.1e-98 364.4 380 54.2
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 1.4e-98 364.0 382 56.0
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 1.8e-98 363.6 383 58.0
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 1.8e-98 363.6 380 57.6
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 7.0e-98 361.7 370 55.7
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 7.0e-98 361.7 386 59.1
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 9.1e-98 361.3 380 57.4
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.0e-97 360.1 385 53.0
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 2.6e-97 359.8 359 56.8
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 3.5e-97 359.4 370 57.8
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 3.5e-97 359.4 371 53.6
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 3.5e-97 359.4 390 54.9
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 5.9e-97 358.6 377 56.0
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 5.9e-97 358.6 374 55.3
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 5.9e-97 358.6 390 58.7
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 5.9e-97 358.6 384 56.8
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 5.9e-97 358.6 378 56.3
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 7.7e-97 358.2 391 56.8
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 1.0e-96 357.8 449 52.6
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 3.8e-96 355.9 371 53.4
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 3.8e-96 355.9 380 57.1
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 3.8e-96 355.9 444 51.4
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 8.5e-96 354.8 391 55.8
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 8.5e-96 354.8 377 56.5
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 8.5e-96 354.8 372 56.2
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 1.1e-95 354.4 389 56.3
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 1.9e-95 353.6 371 54.7
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 3.2e-95 352.8 396 54.5
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 7.2e-95 351.7 360 59.2
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 1.6e-94 350.5 385 52.2
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 4.7e-94 349.0 386 54.1
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 1.0e-93 347.8 348 55.2
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 1.0e-93 347.8 376 56.1
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 5.2e-93 345.5 461 48.2
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 8.8e-93 344.7 390 56.9
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 1.2e-92 344.4 367 53.1
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 2.6e-92 343.2 380 50.8
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 2.2e-91 340.1 393 51.7
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 4.1e-90 335.9 419 50.8
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 9.1e-90 334.7 392 50.0
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 3.5e-89 332.8 376 49.5
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 4.5e-89 332.4 408 48.8
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 8.5e-88 328.2 354 54.0
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 1.1e-87 327.8 361 53.2
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 3.2e-87 326.2 401 54.1
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 2.1e-86 323.6 363 53.2
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 3.0e-85 319.7 367 46.9
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 1.2e-84 317.8 399 49.4
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 2.8e-83 313.2 377 52.3
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 4.8e-83 312.4 415 45.8
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 6.3e-83 312.0 376 51.9
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 1.4e-82 310.8 461 46.9
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 1.0e-80 304.7 326 56.7
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 5.0e-80 302.4 422 43.1
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 1.0e-77 294.7 334 55.1
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 1.2e-73 281.2 372 44.9
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 1.9e-71 273.9 322 50.6
BcaB08g37001 Brassica carinata HOM05D006549 ORTHO05D008080 4.1e-66 256.1 368 43.8
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 1.9e-63 247.3 162 73.5
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.4e-53 214.5 135 77.0
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 1.4e-53 214.5 141 75.2
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 1.2e-44 184.9 379 33.5
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 3.4e-44 183.3 364 33.5
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 3.8e-43 179.9 262 41.2
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 1.1e-42 178.3 364 33.5
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 5.4e-42 176.0 239 44.8
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 4.6e-41 172.9 111 77.5
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 3.6e-38 163.3 362 31.8
HPP92_011577 Vanilla planifolia HOM05D006549 ORTHO05D008080 4.9e-27 126.3 220 40.9
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 2.4e-26 124.0 179 40.8
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 6.7e-24 115.9 291 29.9
MELO3C015170.2 Cucumis melo HOM05D006549 ORTHO05D008080 1.4e-21 108.2 90 64.4
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 8.4e-19 99.0 249 28.1
BolC3t13160H Brassica oleracea HOM05D006549 ORTHO05D008080 4.6e-17 93.2 79 55.7
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 4.6e-17 93.2 71 66.2
Cpa.g.sc84.3 Carica papaya HOM05D006549 ORTHO05D008080 2.3e-16 90.9 55 81.8
Cpa.g.c41750 Carica papaya HOM05D006549 ORTHO05D008080 4.3e-15 86.7 60 68.3
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 1.3e-14 85.1 177 32.2
CSS0036252 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 5.8e-12 76.3 59 67.8


User provided reference genes

Program Settings