Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 8.1e-59 230.3 128 100.0
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 6.9e-42 174.1 118 78.8
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 8.8e-37 157.1 124 69.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 8.8e-37 157.1 121 71.1
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.0e-36 156.0 121 69.4
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.5e-36 155.6 117 72.6
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 2.5e-36 155.6 117 72.6
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 6.3e-35 151.0 114 71.9
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 2.4e-34 149.1 126 65.1
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 2.0e-33 146.0 123 63.4
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 5.9e-33 144.4 121 64.5
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.0e-32 143.7 121 66.1
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.3e-32 143.3 115 67.0
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.7e-32 142.9 123 64.2
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.9e-32 142.1 127 63.0
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 6.5e-32 141.0 122 66.4
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 6.5e-32 141.0 123 60.2
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 2.5e-31 139.0 109 68.8
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 3.2e-31 138.7 127 62.2
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 3.2e-31 138.7 111 66.7
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 3.2e-31 138.7 141 59.6
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 4.2e-31 138.3 125 61.6
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 4.2e-31 138.3 111 71.2
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 7.2e-31 137.5 122 63.1
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.2e-30 136.7 123 63.4
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.6e-30 136.3 120 61.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.1e-30 136.0 117 65.8
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 2.7e-30 135.6 108 68.5
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 2.7e-30 135.6 121 62.8
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.6e-30 135.2 121 62.8
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.6e-30 135.2 127 61.4
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.6e-30 135.2 115 64.3
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 4.7e-30 134.8 117 64.1
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 4.7e-30 134.8 152 53.9
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 6.1e-30 134.4 118 63.6
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.1e-30 134.4 115 63.5
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.1e-30 134.4 115 63.5
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 7.9e-30 134.0 120 62.5
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.0e-29 133.7 130 60.0
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.4e-29 133.3 124 59.7
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-29 133.3 131 59.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.4e-29 133.3 122 63.1
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 1.4e-29 133.3 122 61.5
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 3.0e-29 132.1 113 64.6
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 3.9e-29 131.7 131 58.8
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 6.7e-29 131.0 102 69.6
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 8.8e-29 130.6 117 64.1
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.1e-28 130.2 122 61.5
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.1e-28 130.2 120 64.2
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.0e-28 129.4 109 64.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 3.3e-28 128.6 100 69.0
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 3.3e-28 128.6 86 79.1
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 9.7e-28 127.1 116 60.3
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 2.2e-27 125.9 118 61.9
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.8e-27 125.6 137 54.0
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.7e-27 125.2 109 61.5
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.3e-27 124.4 102 66.7
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 6.3e-27 124.4 108 63.9
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 8.2e-27 124.0 123 56.9
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 1.4e-26 123.2 139 55.4
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 1.8e-26 122.9 108 62.0
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 2.4e-26 122.5 131 56.5
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 4.1e-26 121.7 123 56.1
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 4.1e-26 121.7 119 56.3
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 5.3e-26 121.3 89 74.2
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.1e-26 120.6 129 56.6
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.6e-25 119.0 111 65.8
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 5.9e-25 117.9 105 59.0
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.0e-24 117.1 128 54.7
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 5.0e-24 114.8 94 69.1
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.5e-23 113.2 111 59.5
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 1.9e-23 112.8 111 58.6
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 1.9e-23 112.8 118 56.8
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.9e-23 112.8 119 54.6
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.5e-23 112.5 111 58.6
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 4.2e-23 111.7 126 53.2
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 4.2e-23 111.7 126 53.2
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 4.2e-23 111.7 126 53.2
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 4.2e-23 111.7 126 53.2
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 4.2e-23 111.7 159 47.2
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 5.5e-23 111.3 115 56.5
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 7.2e-23 110.9 111 58.6
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 7.2e-23 110.9 126 52.4
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 2.1e-22 109.4 109 57.8
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 2.1e-22 109.4 75 76.0
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 2.1e-22 109.4 125 56.0
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 8.0e-22 107.5 79 70.9
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 3.0e-21 105.5 74 73.0
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.0e-21 105.1 115 53.0
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.1e-20 103.6 104 59.6
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 1.5e-20 103.2 87 65.5
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 4.4e-20 101.7 106 53.8
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 4.4e-20 101.7 118 53.4
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.3e-19 100.1 77 67.5
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.3e-19 100.1 72 70.8
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 8.2e-19 97.4 81 64.2
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.7e-16 89.7 70 62.9
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 3.8e-16 88.6 94 54.3
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 4.2e-15 85.1 80 58.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.0e-13 80.5 103 46.6
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 1.8e-13 79.7 66 69.7
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 6.8e-13 77.8 65 60.0
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 1.8e-10 69.7 79 57.0
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.0e-09 66.2 113 45.1
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.0e-09 66.2 113 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 1.0e-08 63.9 102 38.2
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 1.3e-08 63.5 53 56.6
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.2e-08 62.8 41 75.6
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 3.8e-08 62.0 72 51.4
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 6.5e-08 61.2 43 72.1
DCAR_001789 Daucus carota HOM05D006869 ORTHO05D008641 4.2e-07 58.5 37 86.5
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 4.7e-06 55.1 52 59.6


User provided reference genes

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