Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17230 Avicennia marina HOM05D008009 ORTHO05D010177 1.0e-137 493.4 258 100.0
CAN.G170.56 Capsicum annuum HOM05D008009 ORTHO05D010177 7.5e-104 380.9 265 75.5
Migut.B01680 Erythranthe guttata HOM05D008009 ORTHO05D010177 2.2e-103 379.4 259 76.8
SGA_v2.0_scaffold95G28877 Striga asiatica HOM05D008009 ORTHO05D010177 1.9e-102 376.3 253 79.4
SalBow3G1346 Salvia bowleyana HOM05D008009 ORTHO05D010177 3.0e-100 369.0 249 77.5
Solyc01g091850.3 Solanum lycopersicum HOM05D008009 ORTHO05D010177 8.6e-100 367.5 266 72.9
Sopen01g037620 Solanum pennellii HOM05D008009 ORTHO05D010177 1.5e-99 366.7 241 77.2
Peaxi162Scf00021g00312 Petunia axillaris HOM05D008009 ORTHO05D010177 5.6e-99 364.8 243 77.4
PGSC0003DMG400000002 Solanum tuberosum HOM05D008009 ORTHO05D010177 7.3e-99 364.4 241 76.8
Potri.014G077600 Populus trichocarpa HOM05D008009 ORTHO05D010177 1.3e-95 353.6 238 75.2
Eucgr.E00219 Eucalyptus grandis HOM05D008009 ORTHO05D010177 3.7e-95 352.1 243 74.1
QL08p050750 Quercus lobata HOM05D008009 ORTHO05D010177 1.2e-93 347.1 237 75.9
DCAR_006901 Daucus carota HOM05D008009 ORTHO05D010177 2.1e-93 346.3 258 69.8
HanXRQChr06g0169381 Helianthus annuus HOM05D008009 ORTHO05D010177 6.0e-93 344.7 251 74.1
unitig_0.g1290 Utricularia gibba HOM05D008009 ORTHO05D010177 7.8e-93 344.4 254 72.4
Cfa021163 Carpinus fangiana HOM05D008009 ORTHO05D010177 1.3e-92 343.6 261 70.9
Haze_15234 Corylus avellana HOM05D008009 ORTHO05D010177 3.9e-92 342.0 240 74.2
GSVIVG01027596001 Vitis vinifera HOM05D008009 ORTHO05D010177 6.6e-92 341.3 239 73.6
Cfa004175 Carpinus fangiana HOM05D008009 ORTHO05D010177 8.6e-92 340.9 261 70.1
PGR042G1113 Punica granatum HOM05D008009 ORTHO05D010177 8.6e-92 340.9 237 74.7
Lsat_1_v5_gn_7_8101 Lactuca sativa HOM05D008009 ORTHO05D010177 1.1e-91 340.5 238 75.2
ECA236G3590 Erigeron canadensis HOM05D008009 ORTHO05D010177 5.6e-91 338.2 264 70.5
Cc02_g37180 Coffea canephora HOM05D008009 ORTHO05D010177 3.6e-90 335.5 239 72.4
FAN01G0151 Fragaria x ananassa HOM05D008009 ORTHO05D010177 4.7e-90 335.1 236 73.3
FAN06G2831 Fragaria x ananassa HOM05D008009 ORTHO05D010177 8.1e-90 334.3 236 73.7
FvH4_7g12940 Fragaria vesca HOM05D008009 ORTHO05D010177 1.4e-89 333.6 236 73.7
RcHm_v2.0_Chr1g0352071 Rosa chinensis HOM05D008009 ORTHO05D010177 1.8e-89 333.2 236 74.2
FAN06G1824 Fragaria x ananassa HOM05D008009 ORTHO05D010177 2.3e-89 332.8 236 73.3
FAN10G4026 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.5e-88 330.1 236 72.5
CANSAT56G2363 Cannabis sativa HOM05D008009 ORTHO05D010177 5.8e-88 328.2 241 71.4
Nitab4.5_0009025g0020 Nicotiana tabacum HOM05D002524 ORTHO05D002718 3.5e-85 318.9 250 70.8
Actinidia27148 Actinidia chinensis HOM05D008009 ORTHO05D010177 4.6e-85 318.5 242 68.6
Nn6g34273 Nelumbo nucifera HOM05D008009 ORTHO05D010177 1.0e-84 317.4 256 64.8
FAN03G0554 Fragaria x ananassa HOM05D008009 ORTHO05D010177 1.7e-84 316.6 240 70.4
Aqoxy5G03972 Aquilegia oxysepala HOM05D008009 ORTHO05D010177 3.9e-84 315.5 242 67.4
Atru.chr5.391 Acer truncatum HOM05D008009 ORTHO05D010177 5.1e-84 315.1 242 71.1
Atru.chr5.397 Acer truncatum HOM05D008009 ORTHO05D010177 6.6e-84 314.7 242 71.1
Psat3g112360 Pisum sativum HOM05D008009 ORTHO05D010177 6.6e-84 314.7 237 68.4
Medtr7g076320 Medicago truncatula HOM05D008009 ORTHO05D010177 1.9e-83 313.2 237 67.5
Dinv43752 Davidia involucrata HOM05D008009 ORTHO05D010177 7.3e-83 311.2 224 75.4
Ca_07869_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 1.2e-82 310.5 237 68.4
Ca_29748_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 1.2e-82 310.5 237 68.4
arahy.Tifrunner.gnm1.ann1.RW66HN Arachis hypogaea HOM05D008009 ORTHO05D010177 4.7e-82 308.5 237 65.8
Glyma.18G228200 Glycine max HOM05D008009 ORTHO05D010177 8.1e-82 307.8 241 66.8
Lj1g0026011 Lotus japonicus HOM05D008009 ORTHO05D010177 1.1e-81 307.4 242 66.5
Nitab4.5_0006706g0010 Nicotiana tabacum HOM05D008009 ORTHO05D010177 1.8e-81 306.6 240 69.2
Phvul.008G070000 Phaseolus vulgaris HOM05D008009 ORTHO05D010177 1.8e-81 306.6 245 64.1
VMungo1383G2711 Vigna mungo HOM05D008009 ORTHO05D010177 4.0e-81 305.4 245 64.1
SEGI_40209 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 7.6e-80 301.2 256 60.9
FAN10G1597 Fragaria x ananassa HOM05D008009 ORTHO05D010177 2.7e-77 292.7 239 66.9
TPR.G37743 Trifolium pratense HOM05D008009 ORTHO05D010177 2.3e-76 289.7 259 61.0
Nitab4.5_0012175g0010 Nicotiana tabacum HOM05D002524 ORTHO05D002718 7.6e-72 274.6 211 68.2
Prupe.2G153700 Prunus persica HOM05D008009 ORTHO05D010177 7.6e-72 274.6 200 74.0
Hma1.2p1_0033F.1_g020690 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 4.2e-70 268.9 199 69.3
EL10Ac1g00970 Beta vulgaris HOM05D008009 ORTHO05D010177 1.6e-69 266.9 244 59.0
COL.COLO4_12632 Corchorus olitorius HOM05D008009 ORTHO05D010177 1.6e-69 266.9 259 58.3
AUR62004286 Chenopodium quinoa HOM05D008009 ORTHO05D010177 2.1e-69 266.5 201 65.7
AUR62033371 Chenopodium quinoa HOM05D008009 ORTHO05D010177 2.3e-68 263.1 201 64.7
Gohir.D08G150200 Gossypium hirsutum HOM05D008009 ORTHO05D010177 2.4e-62 243.0 246 54.5
Gorai.004G156000 Gossypium raimondii HOM05D008009 ORTHO05D010177 2.4e-62 243.0 246 54.5
Pp3c16_7270 Physcomitrium patens HOM05D008009 ORTHO05D010177 9.3e-62 241.1 233 51.5
Pp3c25_40 Physcomitrium patens HOM05D008009 ORTHO05D010177 1.5e-59 233.8 231 51.9
Mapoly0089s0055 Marchantia polymorpha HOM05D008009 ORTHO05D010177 9.6e-59 231.1 238 50.4
Gohir.A08G129000 Gossypium hirsutum HOM05D008009 ORTHO05D010177 1.5e-56 223.8 228 51.8
Ah.05g175960 Amaranthus hybridus HOM05D008009 ORTHO05D010177 2.9e-55 219.5 190 61.6
arahy.Tifrunner.gnm1.ann1.EX28FW Arachis hypogaea HOM05D008009 ORTHO05D010177 3.8e-55 219.2 180 59.4
CiPaw.01G052300 Carya illinoinensis HOM05D008009 ORTHO05D010177 1.8e-49 200.3 231 52.4
Duzib133G0776 Durio zibethinus HOM05D008009 ORTHO05D010177 1.2e-48 197.6 176 59.7
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 5.9e-48 195.3 227 43.2
Nn4g22699 Nelumbo nucifera HOM05D008009 ORTHO05D010177 9.0e-41 171.4 131 61.8
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 5.7e-35 152.1 229 37.6
MBI12_g11808_MAGBIO Magnolia biondii HOM05D008009 ORTHO05D010177 4.1e-33 146.0 123 65.9
Thecc.01G369500 Theobroma cacao HOM05D008009 ORTHO05D010177 2.6e-27 126.7 253 41.1
SEGI_11444 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 7.7e-16 88.6 84 53.6
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 1.1e-14 84.7 242 27.3
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 1.9e-14 84.0 233 28.3
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 7.2e-14 82.0 246 28.0
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 1.2e-13 81.3 241 26.1
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 1.6e-13 80.9 232 27.2
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 2.1e-13 80.5 216 29.2
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 2.1e-13 80.5 216 29.2
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 2.1e-13 80.5 216 29.6
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 2.1e-13 80.5 216 28.7
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 2.7e-13 80.1 216 28.2
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.7e-13 79.3 244 28.3
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 4.7e-13 79.3 216 29.6
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 4.7e-13 79.3 247 27.1
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 4.7e-13 79.3 240 27.1
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 6.1e-13 79.0 244 27.5
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 6.1e-13 79.0 216 28.2
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 8.0e-13 78.6 244 28.7
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 1.0e-12 78.2 219 29.2
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.4e-12 77.8 222 27.5
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 1.8e-12 77.4 241 26.6
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.8e-12 77.4 240 27.5
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.8e-12 77.4 244 27.9
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 3.0e-12 76.6 216 27.8
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 4.0e-12 76.3 224 27.7
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 6.8e-12 75.5 217 28.1
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 6.8e-12 75.5 222 27.0
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 6.8e-12 75.5 216 27.3
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 6.8e-12 75.5 215 27.4
Hma1.2p1_0033F.1_g020670 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 8.8e-12 75.1 41 90.2
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.2e-11 74.7 222 26.1
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 1.2e-11 74.7 219 27.9
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 1.5e-11 74.3 242 25.2
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 1.5e-11 74.3 222 26.6
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.5e-11 74.3 216 26.9
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 1.5e-11 74.3 216 28.2
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 3.4e-11 73.2 223 25.1
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 4.4e-11 72.8 241 25.7
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 7.5e-11 72.0 216 26.4
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 6.3e-10 68.9 222 24.8
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 1.4e-09 67.8 233 26.6
SMO347G0454 Selaginella moellendorffii HOM05D002473 ORTHO05D002666 5.9e-08 62.4 227 25.1
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 1.7e-07 60.8 225 24.9
HanXRQChr15g0484141 Helianthus annuus HOM05D000981 ORTHO05D000845 5.5e-06 55.8 232 25.4


User provided reference genes

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