Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 3.0e-99 365.2 182 100.0
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.1e-93 346.7 178 97.2
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 5.0e-70 268.1 179 74.9
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 4.0e-67 258.5 187 71.1
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.7e-65 253.1 177 71.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 7.0e-64 247.7 179 69.8
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.2e-63 246.9 179 69.8
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 2.7e-63 245.7 179 68.7
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.5e-61 240.0 180 69.4
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.5e-61 240.0 179 68.2
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.5e-61 240.0 179 68.2
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.9e-61 239.6 179 69.3
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.9e-61 239.6 186 68.8
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 2.1e-60 236.1 177 68.9
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.7e-60 235.0 184 67.9
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 8.1e-60 234.2 181 67.4
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.1e-59 232.3 179 67.6
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 4.4e-58 228.4 182 67.0
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 5.8e-58 228.0 181 66.9
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.9e-57 225.7 188 62.8
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.2e-56 222.2 180 64.4
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 2.1e-55 219.5 180 65.0
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 7.8e-55 217.6 183 63.4
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.3e-54 216.9 172 68.0
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 3.9e-54 215.3 173 67.6
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 8.6e-54 214.2 186 65.1
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 1.9e-53 213.0 181 63.5
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.9e-53 213.0 186 64.0
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 7.3e-53 211.1 183 63.4
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 7.3e-53 211.1 182 63.7
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 7.3e-53 211.1 183 63.4
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 1.2e-52 210.3 172 66.9
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-52 210.3 186 63.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 1.6e-52 209.9 184 63.6
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 2.1e-52 209.5 182 63.7
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 2.1e-52 209.5 182 63.7
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.1e-52 209.5 184 62.5
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 2.8e-52 209.1 182 63.2
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 6.2e-52 208.0 181 65.2
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 6.2e-52 208.0 182 64.3
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.1e-51 207.2 182 63.2
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.4e-51 206.1 144 72.2
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.4e-51 206.1 188 61.2
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 3.1e-51 205.7 179 63.1
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 8.9e-51 204.1 144 72.9
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.2e-50 203.8 188 61.2
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.2e-50 203.8 188 61.2
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.2e-50 203.8 188 61.2
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.2e-50 203.8 183 61.7
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.5e-50 203.4 181 61.9
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.5e-50 203.4 180 62.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 3.4e-50 202.2 179 62.0
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.4e-50 201.8 184 62.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 9.9e-50 200.7 188 59.0
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.7e-49 199.9 179 62.6
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.9e-49 199.1 155 69.7
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 3.8e-49 198.7 179 62.0
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.1e-48 197.2 193 57.5
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 4.1e-48 195.3 148 69.6
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 4.1e-48 195.3 152 67.1
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 7.1e-48 194.5 186 58.1
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 7.1e-48 194.5 174 61.5
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.2e-47 193.7 149 71.1
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.2e-47 193.7 180 63.3
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.1e-47 193.0 186 60.2
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.1e-47 193.0 186 60.8
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 6.0e-47 191.4 134 72.4
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 6.0e-47 191.4 160 63.1
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 7.8e-47 191.0 148 68.9
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.3e-46 190.3 186 59.7
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 1.7e-46 189.9 139 70.5
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 3.0e-46 189.1 182 58.8
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 5.1e-46 188.3 151 66.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 8.7e-46 187.6 151 65.6
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.5e-45 186.8 189 57.1
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.5e-45 186.8 170 58.8
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.5e-45 186.8 151 66.2
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-45 186.8 145 69.7
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.5e-45 186.0 151 65.6
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.5e-45 186.0 140 68.6
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 2.5e-45 186.0 155 67.7
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.3e-45 185.7 145 69.0
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 3.3e-45 185.7 191 53.9
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 4.3e-45 185.3 196 54.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 7.3e-45 184.5 187 55.1
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.1e-44 183.0 189 56.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 3.6e-44 182.2 140 69.3
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 8.1e-44 181.0 175 57.7
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.4e-43 180.3 145 70.3
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.8e-43 179.9 149 67.1
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.4e-43 179.5 151 62.9
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.5e-42 176.8 180 61.1
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 2.6e-42 176.0 142 68.3
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 5.8e-42 174.9 141 67.4
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 2.2e-41 172.9 153 62.1
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.9e-41 171.8 142 60.6
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 1.1e-40 170.6 192 54.2
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 1.4e-40 170.2 145 64.8
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.2e-40 168.7 146 62.3
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 4.2e-40 168.7 142 65.5
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.4e-40 168.3 148 63.5
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 5.1e-38 161.8 180 53.3
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 6.6e-38 161.4 147 60.5
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.3e-37 157.9 134 65.7
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 4.8e-36 155.2 177 53.1
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.1e-35 154.1 178 50.6
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 3.1e-35 152.5 141 60.3
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 4.5e-34 148.7 146 57.5
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.8e-30 136.7 97 74.2
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.5e-29 132.9 114 60.5
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.6e-29 131.7 87 78.2
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 9.6e-29 131.0 97 67.0
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.1e-27 127.5 98 63.3
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.4e-27 127.1 162 51.2
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.2e-26 124.0 142 46.5
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 1.5e-26 123.6 97 67.0
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.0e-26 123.2 110 57.3
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.2e-23 114.0 148 48.0
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.7e-23 112.8 75 73.3
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.6e-23 112.1 68 83.8
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 7.9e-23 111.3 88 70.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 5.6e-21 105.1 103 50.5
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.0e-17 94.4 83 53.0
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 3.2e-16 89.4 72 56.9
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 4.2e-16 89.0 63 63.5
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 6.7e-14 81.6 108 50.9
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.4e-11 73.2 46 78.3
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 3.9e-06 55.8 67 41.8


User provided reference genes

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