Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 1.2e-113 413.3 219 100.0
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.5e-68 263.5 219 69.9
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 5.6e-68 261.5 219 69.4
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 8.1e-67 257.7 228 65.8
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.4e-63 246.9 228 64.9
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 3.3e-60 235.7 232 60.3
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 2.8e-59 232.6 214 65.4
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 3.7e-59 232.3 218 61.9
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 4.8e-59 231.9 193 62.7
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 4.8e-59 231.9 224 62.1
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.8e-59 231.9 218 61.9
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 6.3e-59 231.5 218 61.5
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 8.2e-59 231.1 205 63.9
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 1.8e-58 229.9 227 58.1
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.4e-58 229.6 248 57.7
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 4.1e-58 228.8 251 58.2
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 9.0e-58 227.6 223 60.1
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.5e-57 226.9 215 61.9
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 2.0e-57 226.5 185 65.9
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 2.0e-57 226.5 201 62.2
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.0e-57 226.5 211 61.6
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 2.0e-57 226.5 241 58.1
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 5.9e-57 224.9 217 60.4
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 7.6e-57 224.6 217 59.9
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 7.6e-57 224.6 217 60.4
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 7.6e-57 224.6 185 67.6
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 1.0e-56 224.2 178 66.3
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 1.0e-56 224.2 241 58.5
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 1.0e-56 224.2 214 60.3
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 1.7e-56 223.4 241 58.1
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 3.8e-56 222.2 206 60.2
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 3.8e-56 222.2 218 60.1
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 5.0e-56 221.9 175 67.4
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 5.0e-56 221.9 175 67.4
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 6.5e-56 221.5 178 64.6
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.5e-56 221.5 184 61.4
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 6.5e-56 221.5 182 67.6
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 8.5e-56 221.1 175 66.9
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 8.5e-56 221.1 175 66.9
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 8.5e-56 221.1 196 63.3
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 8.5e-56 221.1 229 56.3
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.1e-55 220.7 172 67.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.4e-55 220.3 227 61.2
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 1.4e-55 220.3 184 67.9
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 1.4e-55 220.3 215 58.6
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 1.9e-55 219.9 224 58.5
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.9e-55 219.9 206 63.6
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.9e-55 219.9 176 66.5
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 2.5e-55 219.5 224 57.6
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.5e-55 219.5 206 63.6
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 3.2e-55 219.2 215 58.1
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 4.2e-55 218.8 206 61.7
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 5.5e-55 218.4 209 59.3
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 7.2e-55 218.0 164 69.5
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 7.2e-55 218.0 201 62.7
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 7.2e-55 218.0 221 58.4
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 9.3e-55 217.6 169 65.1
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 9.3e-55 217.6 169 65.1
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 9.3e-55 217.6 169 65.1
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 9.3e-55 217.6 199 63.3
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 9.3e-55 217.6 218 58.3
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 9.3e-55 217.6 225 57.8
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 1.2e-54 217.2 202 62.9
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.6e-54 216.9 224 58.5
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.7e-54 216.1 216 56.5
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 3.6e-54 215.7 156 70.5
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 4.6e-54 215.3 166 69.9
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.0e-53 214.2 197 61.9
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 1.0e-53 214.2 222 57.2
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 1.3e-53 213.8 205 59.5
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 1.3e-53 213.8 207 61.8
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.8e-53 213.4 225 57.3
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.8e-53 213.4 202 60.4
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.3e-53 213.0 185 63.2
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.3e-53 213.0 196 61.2
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 3.0e-53 212.6 204 60.8
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 3.9e-53 212.2 209 57.4
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 3.9e-53 212.2 239 52.3
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 8.7e-53 211.1 171 64.9
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 8.7e-53 211.1 204 60.3
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 8.7e-53 211.1 179 64.8
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 1.5e-52 210.3 197 60.4
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 1.9e-52 209.9 198 61.6
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 1.9e-52 209.9 209 56.5
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 2.5e-52 209.5 215 57.7
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 3.3e-52 209.1 211 59.2
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 5.7e-52 208.4 212 57.1
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 5.7e-52 208.4 223 55.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 7.4e-52 208.0 211 57.8
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 1.3e-51 207.2 217 56.2
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.3e-51 207.2 203 60.1
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 6.3e-51 204.9 211 57.3
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 8.2e-51 204.5 220 55.5
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 1.4e-50 203.8 219 56.2
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 4.1e-50 202.2 229 55.5
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.2e-49 200.7 194 55.7
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 2.0e-49 199.9 224 53.6
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 4.2e-47 192.2 203 57.1
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 5.5e-47 191.8 135 70.4
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 1.2e-46 190.7 221 54.3
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 7.4e-44 181.4 128 71.1
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 4.8e-43 178.7 214 51.4
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 6.3e-43 178.3 146 62.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 1.1e-42 177.6 166 54.8
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.8e-42 176.8 125 71.2
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 2.4e-42 176.4 151 64.9
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 2.0e-41 173.3 117 75.2
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.0e-40 171.0 177 58.8
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 6.5e-40 168.3 138 65.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.1e-39 167.5 143 65.0
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 2.7e-38 162.9 210 52.9
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.6e-38 162.5 209 47.8
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 7.9e-38 161.4 217 45.6
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 7.9e-38 161.4 228 45.6
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 1.1e-36 157.5 219 44.3
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 4.4e-36 155.6 216 46.8
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 7.4e-36 154.8 155 57.4
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 9.7e-36 154.5 201 47.3
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 9.7e-36 154.5 204 45.6
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 2.8e-35 152.9 129 65.1
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 2.2e-27 126.7 114 60.5
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 2.0e-25 120.2 66 83.3
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.1e-22 110.2 158 45.6
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.3e-21 106.7 158 43.0
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 1.4e-18 97.4 137 42.3
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.5e-15 87.4 97 54.6
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 4.9e-11 72.4 87 49.4
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 2.4e-10 70.1 230 33.0
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 3.1e-10 69.7 83 51.8


User provided reference genes

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