Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 5.1e-193 677.6 337 100.0
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 1.9e-139 499.6 343 76.1
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 2.0e-133 479.6 346 73.7
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 3.6e-130 468.8 323 74.9
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 3.6e-130 468.8 326 74.2
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 4.7e-130 468.4 340 72.4
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 1.8e-129 466.5 340 71.8
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 8.8e-129 464.2 332 74.1
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 1.2e-128 463.8 339 72.6
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 1.2e-125 453.8 346 70.8
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 1.2e-125 453.8 302 76.2
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 8.5e-124 447.6 293 76.1
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 1.9e-123 446.4 351 68.4
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 2.5e-123 446.0 345 69.6
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 1.6e-122 443.4 350 68.6
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 3.6e-122 442.2 299 75.3
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 3.6e-122 442.2 347 68.6
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 8.0e-122 441.0 320 70.9
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.4e-121 440.3 299 76.3
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 5.2e-121 438.3 320 70.9
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 6.8e-121 438.0 327 70.9
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 8.8e-121 437.6 345 69.6
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 1.2e-120 437.2 343 68.5
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 2.0e-120 436.4 337 68.2
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.7e-119 433.3 345 65.5
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.2e-119 433.0 347 64.6
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 2.8e-119 432.6 346 67.3
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 8.3e-119 431.0 346 65.6
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 8.3e-119 431.0 343 66.8
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 1.1e-118 430.6 300 73.7
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 1.4e-118 430.3 298 73.5
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 2.4e-118 429.5 255 82.7
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 3.1e-118 429.1 313 70.3
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 4.1e-118 428.7 346 64.7
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 7.0e-118 427.9 345 65.5
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 9.1e-118 427.6 314 70.4
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.6e-117 426.8 319 69.3
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 1.6e-117 426.8 319 69.3
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 5.9e-117 424.9 340 65.0
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 2.3e-116 422.9 325 69.8
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 2.9e-116 422.5 332 67.5
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 5.0e-116 421.8 332 66.6
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 8.6e-116 421.0 352 64.2
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 1.1e-115 420.6 290 72.8
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 1.5e-115 420.2 302 72.2
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.5e-115 420.2 351 64.7
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.5e-115 419.5 352 64.2
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 4.2e-115 418.7 322 69.3
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 5.6e-115 418.3 326 69.0
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 7.2e-115 417.9 302 70.9
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 7.2e-115 417.9 299 71.2
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 3.6e-114 415.6 322 70.2
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 1.0e-113 414.1 350 65.1
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 1.4e-113 413.7 335 66.6
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 3.0e-113 412.5 365 61.1
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 4.0e-113 412.1 388 60.3
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 1.5e-112 410.2 265 74.3
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 3.4e-112 409.1 317 65.6
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 5.7e-112 408.3 352 62.5
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 9.8e-112 407.5 344 64.2
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 9.8e-112 407.5 317 66.2
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 8.3e-111 404.4 342 64.0
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 1.1e-110 404.1 322 64.9
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 1.8e-110 403.3 302 67.5
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 2.4e-110 402.9 296 69.3
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 4.1e-110 402.1 299 68.2
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 4.1e-110 402.1 300 67.0
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 4.1e-110 402.1 325 64.9
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 1.2e-109 400.6 340 64.7
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 2.7e-109 399.4 343 62.4
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 3.5e-109 399.1 326 63.8
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 3.5e-109 399.1 343 64.7
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 4.6e-109 398.7 255 78.0
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 1.0e-108 397.5 345 62.9
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 1.7e-108 396.7 329 62.9
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 2.3e-108 396.4 324 63.9
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 3.9e-108 395.6 319 64.9
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 3.9e-108 395.6 296 67.9
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 1.1e-107 394.0 335 62.4
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 1.1e-107 394.0 335 62.4
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 1.1e-107 394.0 297 68.4
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 2.5e-107 392.9 335 62.4
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 2.5e-107 392.9 335 62.4
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 3.3e-107 392.5 293 67.9
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 5.6e-107 391.7 332 64.8
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 5.6e-107 391.7 325 66.2
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 7.3e-107 391.3 258 74.8
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 2.2e-103 379.8 300 65.0
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 3.3e-99 365.9 307 65.5
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 3.3e-99 365.9 264 70.5
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 6.2e-98 361.7 229 74.7
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 1.0e-92 344.4 299 58.2
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 5.6e-91 338.6 304 62.8
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 1.1e-86 324.3 312 57.7
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 1.2e-82 310.8 353 54.1
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 2.2e-79 300.1 274 54.7
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 2.9e-79 299.7 255 60.8
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 1.6e-77 293.9 173 83.2
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 6.6e-76 288.5 313 47.9
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 2.4e-70 270.0 163 79.1
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 6.0e-69 265.4 342 43.6
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.9e-63 246.5 187 66.3
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 5.1e-60 235.7 144 77.8
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 5.6e-59 232.3 224 50.4
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.1e-52 209.1 167 64.1
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.1e-51 208.0 132 78.0
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 5.3e-49 199.1 126 75.4
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 5.3e-49 199.1 126 75.4
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 9.0e-49 198.4 132 73.5
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 6.7e-44 182.2 305 36.4
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 6.1e-37 159.1 265 33.6
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 9.1e-33 145.2 160 57.5
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 1.9e-30 137.5 107 69.2
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 1.9e-30 137.5 238 35.3
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 3.0e-20 103.6 83 62.7
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 8.8e-20 102.1 202 37.1
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 3.3e-19 100.1 53 86.8
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 9.7e-19 98.6 94 53.2
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 2.9e-15 87.0 72 52.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.2e-11 75.1 116 44.8
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 1.7e-10 71.2 127 37.0
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 4.8e-10 69.7 127 36.2
EL10Ac4g09000 Beta vulgaris HOM05D006315 ORTHO05D008052 5.4e-09 66.2 38 78.9
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 5.0e-07 59.7 38 71.1
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 5.0e-07 59.7 38 71.1


User provided reference genes

Program Settings