Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16911 Avicennia marina HOM05D024920 ORTHO05D023790 2.7e-58 228.4 112 100.0
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 1.3e-36 156.4 75 98.7
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 6.3e-15 84.3 101 48.5
SGA_v2.0_scaffold23G10207 Striga asiatica HOM05D024920 ORTHO05D023790 1.5e-11 73.2 100 44.0
SGA_v2.0_scaffold254G45216 Striga asiatica HOM05D024920 ORTHO05D023790 2.5e-11 72.4 100 44.0
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 7.2e-11 70.9 106 44.3
SGA_v2.0_scaffold87G27159 Striga asiatica HOM05D024920 ORTHO05D023790 1.6e-10 69.7 94 43.6
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.7e-10 68.2 99 40.4
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 6.1e-10 67.8 99 40.4
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.4e-09 66.6 107 40.2
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.4e-09 66.6 107 40.2
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.0e-09 65.1 106 39.6
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.0e-09 65.1 107 39.3
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.0e-09 65.1 107 39.3
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 6.8e-09 64.3 99 41.4
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 1.5e-08 63.2 108 43.5
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-08 63.2 108 43.5
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.0e-08 62.8 107 39.3
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 2.0e-08 62.8 106 43.4
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 7.5e-08 60.8 107 38.3
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.3e-07 60.1 98 39.8
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.3e-07 57.8 110 34.5
COL.COLO4_32982 Corchorus olitorius HOM05D019187 ORTHO05D007344 1.1e-06 57.0 94 36.2
Lj6g0002297 Lotus japonicus HOM05D000030 ORTHO05D000009 1.1e-06 57.0 95 36.8
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 1.1e-06 57.0 110 34.5
Dinv32675 Davidia involucrata HOM05D022575 ORTHO05D020547 1.4e-06 56.6 67 41.8
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 2.4e-06 55.8 99 38.4
Dinv22059 Davidia involucrata HOM05D022575 ORTHO05D020547 7.0e-06 54.3 63 42.9
Glyma.03G093900 Glycine max HOM05D000030 ORTHO05D000009 9.1e-06 53.9 116 35.3


User provided reference genes

Program Settings