Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 5.5e-156 554.3 284 100.0
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 9.2e-71 271.2 289 52.6
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 1.5e-49 200.7 281 41.3
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 4.2e-39 166.0 277 38.6
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 1.9e-36 157.1 260 38.1
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 8.2e-35 151.8 172 48.3
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 2.6e-33 146.7 221 40.3
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 4.5e-33 146.0 234 38.5
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 5.0e-32 142.5 245 35.9
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 1.4e-31 141.0 216 37.5
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 1.9e-31 140.6 232 37.1
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 1.2e-30 137.9 232 37.1
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 2.7e-30 136.7 207 40.6
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 4.6e-30 136.0 299 34.8
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.0e-29 134.8 235 37.9
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.8e-29 134.0 224 38.4
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.1e-28 131.3 295 35.9
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 3.3e-28 129.8 244 37.7
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 3.3e-28 129.8 222 36.5
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 4.3e-28 129.4 212 37.7
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.7e-28 129.0 222 36.5
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.3e-27 127.9 203 39.4
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 1.3e-27 127.9 222 36.5
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.6e-27 127.5 222 36.5
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.6e-27 127.5 220 35.5
MSTRG.5498 Avicennia marina HOM05D003589 ORTHO05D005170 2.2e-27 127.1 240 33.8
GSVIVG01030180001 Vitis vinifera HOM05D003589 ORTHO05D005170 2.8e-27 126.7 300 32.3
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 4.8e-27 125.9 244 33.2
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 4.8e-27 125.9 298 32.6
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 6.3e-27 125.6 259 31.7
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 8.2e-27 125.2 160 41.2
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 8.2e-27 125.2 273 34.1
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.8e-26 124.0 200 38.0
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 1.8e-26 124.0 205 38.0
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 4.1e-26 122.9 176 37.5
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 4.1e-26 122.9 202 38.6
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 6.9e-26 122.1 262 33.6
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 9.0e-26 121.7 221 34.8
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 9.0e-26 121.7 222 35.1
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 9.0e-26 121.7 222 35.1
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 9.0e-26 121.7 234 35.0
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 9.0e-26 121.7 218 37.2
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 1.5e-25 120.9 225 37.8
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 2.0e-25 120.6 176 37.5
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 2.0e-25 120.6 168 37.5
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.0e-25 120.6 255 34.5
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 4.5e-25 119.4 273 33.7
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 5.9e-25 119.0 209 40.2
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 7.7e-25 118.6 205 32.7
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 7.7e-25 118.6 176 36.9
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 1.0e-24 118.2 94 58.5
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.9e-24 116.7 197 36.0
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 2.9e-24 116.7 205 36.6
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 5.0e-24 115.9 179 43.0
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 1.4e-23 114.4 204 34.8
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.4e-23 114.4 205 35.6
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 1.9e-23 114.0 223 36.8
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.5e-23 113.6 179 39.1
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 7.2e-23 112.1 195 37.4
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 1.2e-22 111.3 174 40.2
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 2.7e-22 110.2 232 35.8
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 4.6e-22 109.4 233 34.8
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 6.1e-22 109.0 221 33.9
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 1.4e-21 107.8 258 32.2
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 1.4e-21 107.8 261 30.7
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.3e-21 107.1 193 36.8
Eucgr.A00727 Eucalyptus grandis HOM05D003589 ORTHO05D005170 5.1e-21 105.9 223 35.9
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 6.7e-21 105.5 176 35.2
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 8.8e-21 105.1 240 34.6
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 8.8e-21 105.1 224 32.1
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-20 104.8 222 34.2
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-20 104.8 222 34.2
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.1e-20 104.8 222 34.2
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 1.5e-20 104.4 205 32.7
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 2.0e-20 104.0 199 38.2
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 2.6e-20 103.6 235 34.5
Migut.J00036 Erythranthe guttata HOM05D003589 ORTHO05D005170 5.7e-20 102.4 266 28.9
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 5.7e-20 102.4 234 34.6
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 1.3e-19 101.3 269 31.6
DCAR_028921 Daucus carota HOM05D003589 ORTHO05D005170 2.8e-19 100.1 223 34.5
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 3.7e-19 99.8 235 33.2
Oeu057998.1 Olea europaea HOM05D003589 ORTHO05D005170 6.3e-19 99.0 109 47.7
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.1e-18 98.2 159 34.6
Potri.006G108400 Populus trichocarpa HOM05D003589 ORTHO05D005170 1.1e-18 98.2 211 34.6
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.1e-18 98.2 164 31.1
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 2.4e-18 97.1 162 38.9
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 4.1e-18 96.3 258 31.4
TWI77G0120 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 4.1e-18 96.3 221 32.6
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 5.3e-18 95.9 207 31.9
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 6.9e-18 95.5 320 30.0
Cfa017032 Carpinus fangiana HOM05D003589 ORTHO05D005170 9.1e-18 95.1 187 34.2
arahy.Tifrunner.gnm1.ann1.IRJT2S Arachis hypogaea HOM05D003589 ORTHO05D005170 2.0e-17 94.0 217 33.6
THA.LOC104806162 Tarenaya hassleriana HOM05D003589 ORTHO05D005170 2.6e-17 93.6 245 33.5
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 4.5e-17 92.8 239 26.4
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 5.9e-17 92.4 207 33.8
COL.COLO4_19418 Corchorus olitorius HOM05D003589 ORTHO05D005170 5.9e-17 92.4 174 36.2
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 1.3e-16 91.3 147 34.7
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 1.7e-16 90.9 195 35.4
arahy.Tifrunner.gnm1.ann1.US8I5D Arachis hypogaea HOM05D003589 ORTHO05D005170 2.9e-16 90.1 197 35.0
HPP92_015592 Vanilla planifolia HOM05D003589 ORTHO05D005170 1.1e-15 88.2 211 32.2
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 1.9e-15 87.4 220 30.9
Sed0028030 Sechium edule HOM05D003589 ORTHO05D005170 5.5e-15 85.9 138 38.4
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 7.2e-15 85.5 195 33.3
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 1.6e-14 84.3 192 31.2
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 2.1e-14 84.0 202 33.2
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 4.7e-14 82.8 186 35.5
MD12G1188500 Malus domestica HOM05D003589 ORTHO05D005170 6.1e-14 82.4 191 34.6
Aa31LG1G13800 Aethionema arabicum HOM05D003589 ORTHO05D005170 2.3e-13 80.5 202 31.2
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 2.3e-13 80.5 158 30.4
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 5.2e-13 79.3 216 31.5
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 8.8e-13 78.6 223 26.5
Gohir.A05G402800 Gossypium hirsutum HOM05D003589 ORTHO05D005170 1.5e-12 77.8 165 32.1
Oeu060212.1 Olea europaea HOM05D003589 ORTHO05D005170 2.6e-12 77.0 68 55.9
ECA247G3378 Erigeron canadensis HOM05D000259 ORTHO05D000155 3.3e-12 76.6 114 39.5
Sabra06G0084600 Salix brachista HOM05D003589 ORTHO05D005170 4.4e-12 76.3 121 39.7
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 5.7e-12 75.9 125 37.6
Sabra04G0153600 Salix brachista HOM05D003589 ORTHO05D005170 7.4e-12 75.5 176 35.2
Gohir.D04G012700 Gossypium hirsutum HOM05D003589 ORTHO05D005170 9.7e-12 75.1 166 31.9
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 1.3e-11 74.7 160 34.4
HanXRQChr10g0287531 Helianthus annuus HOM05D003589 ORTHO05D005170 1.7e-11 74.3 96 41.7
Medtr7g073280 Medicago truncatula HOM05D003589 ORTHO05D005170 1.7e-11 74.3 199 29.6
Gorai.012G015000 Gossypium raimondii HOM05D003589 ORTHO05D005170 3.7e-11 73.2 166 31.3
Lsat_1_v5_gn_9_38921 Lactuca sativa HOM05D003589 ORTHO05D005170 1.1e-10 71.6 118 37.3
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 9.1e-10 68.6 195 32.3
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.6e-09 67.0 162 31.5
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 3.5e-09 66.6 196 29.6
unitig_578.g15914 Utricularia gibba HOM05D003589 ORTHO05D005170 3.8e-08 63.2 216 25.5
Zm00001eb290650 Zea mays HOM05D003589 ORTHO05D005170 1.5e-07 61.2 215 27.4
Manes.08G171100 Manihot esculenta HOM05D003589 ORTHO05D005170 9.4e-07 58.5 159 28.3
Os05g0478200 Oryza sativa ssp. japonica HOM05D003589 ORTHO05D005170 8.0e-06 55.5 210 26.2


User provided reference genes

Program Settings