Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 3.5e-182 641.3 293 100.0
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 9.0e-162 573.5 301 86.7
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 6.7e-157 557.4 285 85.3
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 3.7e-155 551.6 293 83.6
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 6.2e-155 550.8 314 80.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 8.1e-155 550.4 293 82.3
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.8e-154 549.3 293 83.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.8e-154 549.3 285 84.9
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 2.4e-154 548.9 285 84.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 4.0e-154 548.1 293 83.6
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 9.0e-154 547.0 293 82.6
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.2e-153 546.6 293 81.6
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-153 545.8 293 82.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.0e-153 545.8 293 81.9
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.0e-153 545.8 285 84.2
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 4.5e-153 544.7 284 84.2
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.5e-153 544.7 293 81.9
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.5e-153 544.7 293 82.9
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.5e-153 544.7 293 82.3
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 5.8e-153 544.3 285 84.2
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 5.8e-153 544.3 282 84.0
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 7.6e-153 543.9 287 81.5
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.7e-152 542.7 285 83.2
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 2.2e-152 542.3 285 84.6
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.2e-152 542.3 293 81.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.2e-152 542.3 293 82.6
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.2e-152 542.3 293 82.3
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 2.2e-152 542.3 292 81.8
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 6.4e-152 540.8 293 82.6
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 6.4e-152 540.8 293 81.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 8.4e-152 540.4 293 82.6
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 8.4e-152 540.4 293 82.3
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.1e-151 540.0 293 81.9
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.1e-151 540.0 293 82.6
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.4e-151 539.7 293 81.6
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.4e-151 539.7 285 83.5
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.9e-151 539.3 287 82.6
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 2.4e-151 538.9 284 84.2
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 4.2e-151 538.1 293 80.9
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.2e-151 538.1 293 82.6
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 4.2e-151 538.1 285 82.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 4.2e-151 538.1 293 82.6
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 5.5e-151 537.7 284 83.5
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 5.5e-151 537.7 293 82.3
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 5.5e-151 537.7 293 81.9
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 9.3e-151 537.0 284 83.5
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 9.3e-151 537.0 285 82.8
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.2e-150 536.6 285 82.8
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 2.1e-150 535.8 293 81.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 2.7e-150 535.4 286 81.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.7e-150 535.4 293 80.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 7.9e-150 533.9 294 80.3
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.0e-149 533.5 285 82.1
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.3e-149 533.1 285 82.5
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.8e-149 532.7 285 82.8
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.3e-149 532.3 293 79.9
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.3e-149 532.3 288 81.2
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 3.9e-149 531.6 293 79.5
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 3.3e-148 528.5 293 80.2
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 3.3e-148 528.5 284 82.0
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 3.3e-148 528.5 285 81.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.3e-148 528.1 316 75.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 9.6e-148 526.9 284 81.7
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 9.6e-148 526.9 282 81.2
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.3e-147 526.6 293 78.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 1.3e-147 526.6 293 78.5
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.3e-147 526.6 282 82.6
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.3e-147 526.6 315 76.5
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 2.8e-147 525.4 317 74.4
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 4.8e-147 524.6 288 79.2
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 6.2e-147 524.2 293 77.8
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 8.2e-147 523.9 282 81.9
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.4e-146 523.1 282 80.5
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.4e-146 523.1 288 78.8
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.8e-146 522.7 284 81.0
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 5.3e-146 521.2 282 80.5
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 5.3e-146 521.2 282 80.5
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 9.0e-146 520.4 282 80.9
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.5e-145 519.6 283 81.6
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 4.9e-144 514.6 292 79.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 8.4e-144 513.8 297 77.8
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 5.5e-143 511.1 322 71.4
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 2.7e-142 508.8 286 78.0
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 4.6e-142 508.1 297 78.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.3e-139 500.0 280 78.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 9.4e-135 483.8 297 75.1
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 2.3e-133 479.2 285 74.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.5e-132 476.5 318 71.1
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 2.0e-132 476.1 293 73.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.8e-130 469.5 280 72.9
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.0e-129 466.1 285 73.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 6.5e-128 461.1 285 75.4
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.2e-126 456.8 280 69.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 2.1e-126 456.1 291 67.0
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 6.1e-126 454.5 280 71.1
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 5.7e-116 421.4 283 66.8
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 7.2e-111 404.4 532 43.6
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 2.7e-105 386.0 267 69.3
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 3.5e-105 385.6 213 79.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 3.1e-98 362.5 200 79.5
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.2e-90 334.3 248 65.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 6.0e-81 305.1 338 43.8
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 1.7e-80 303.5 190 71.6
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.7e-80 303.5 319 43.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 7.8e-73 278.1 285 45.3
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.7e-72 276.9 286 45.5
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 3.0e-56 223.0 186 56.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.9e-55 220.3 126 76.2
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.5e-55 219.9 129 75.2
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.4e-53 214.2 160 62.5
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.7e-51 207.2 314 39.2
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 2.7e-49 199.9 138 71.0
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 4.8e-46 189.1 196 44.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.5e-44 184.1 204 48.5
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 5.3e-21 105.9 49 87.8
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.8e-14 83.6 84 46.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 4.2e-10 69.7 74 50.0
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 9.4e-10 68.6 32 84.4
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 2.0e-07 60.8 130 31.5
Pp3s30_380 Physcomitrium patens HOM05D000068 ORTHO05D020444 2.6e-07 60.5 110 35.5
Pp3s30_381 Physcomitrium patens HOM05D000068 ORTHO05D020444 2.6e-07 60.5 110 35.5
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 3.3e-07 60.1 34 70.6
HanXRQChr04g0097271 Helianthus annuus HOM05D000363 ORTHO05D000236 4.4e-07 59.7 156 28.8
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 4.4e-07 59.7 32 65.6
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 9.7e-07 58.5 114 32.5
Lsat_1_v5_gn_7_19141 Lactuca sativa HOM05D000363 ORTHO05D000236 9.7e-07 58.5 118 28.8
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.8e-06 57.0 35 62.9
Solyc02g078570.3 Solanum lycopersicum HOM05D000363 ORTHO05D000236 3.7e-06 56.6 153 29.4
Sopen02g023420 Solanum pennellii HOM05D000363 ORTHO05D000236 6.3e-06 55.8 153 28.8


User provided reference genes

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