Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 9.2e-79 297.0 167 100.0
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 1.6e-59 233.0 159 80.5
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.2e-57 226.9 161 78.9
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 1.2e-57 226.9 161 78.9
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.8e-56 221.9 151 82.1
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.8e-56 221.9 151 82.1
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 6.4e-56 221.1 155 79.4
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 8.4e-56 220.7 157 77.7
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 8.4e-56 220.7 155 79.4
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 7.1e-55 217.6 163 76.1
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 1.2e-54 216.9 158 77.2
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 3.5e-54 215.3 159 78.0
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 7.9e-54 214.2 156 77.6
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 5.1e-53 211.5 153 75.2
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.7e-53 210.7 160 76.2
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.9e-52 209.5 156 76.3
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.5e-52 209.1 152 75.0
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 3.3e-52 208.8 151 74.2
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 4.3e-52 208.4 143 81.1
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 4.3e-52 208.4 154 74.0
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 5.6e-52 208.0 157 76.4
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 7.4e-52 207.6 152 77.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 7.4e-52 207.6 152 77.6
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 9.6e-52 207.2 150 75.3
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 1.3e-51 206.8 152 75.0
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.3e-51 206.8 151 76.8
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.6e-51 206.5 150 74.7
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.6e-51 206.5 151 76.8
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 2.1e-51 206.1 147 74.1
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.1e-51 206.1 156 75.0
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-51 204.9 149 75.8
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 4.8e-51 204.9 149 75.8
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 4.8e-51 204.9 147 74.1
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 4.8e-51 204.9 147 76.2
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 6.2e-51 204.5 154 74.0
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.1e-50 203.8 148 75.7
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.1e-50 203.8 144 78.5
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-50 203.4 154 73.4
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.4e-50 202.6 151 72.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.0e-50 201.8 154 72.7
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.0e-50 201.8 154 72.7
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 4.0e-50 201.8 150 74.0
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 4.0e-50 201.8 165 72.1
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.3e-50 201.4 148 75.0
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.0e-49 199.5 147 72.1
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.4e-49 198.7 143 76.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 3.4e-49 198.7 144 76.4
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 3.4e-49 198.7 150 72.7
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 4.5e-49 198.4 177 67.2
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 5.8e-49 198.0 150 72.0
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 5.8e-49 198.0 148 73.6
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.0e-48 197.2 147 72.8
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 1.7e-48 196.4 152 70.4
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 2.9e-48 195.7 151 71.5
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 3.8e-48 195.3 152 70.4
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 3.8e-48 195.3 154 68.2
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 3.8e-48 195.3 154 67.5
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 3.8e-48 195.3 154 68.2
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 3.8e-48 195.3 150 71.3
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 4.9e-48 194.9 140 73.6
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 4.9e-48 194.9 149 70.5
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 6.5e-48 194.5 154 67.5
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 1.1e-47 193.7 151 72.2
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 1.4e-47 193.4 148 69.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.9e-47 193.0 154 66.9
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 1.9e-47 193.0 159 67.9
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 3.2e-47 192.2 154 66.2
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 3.2e-47 192.2 154 66.2
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 3.2e-47 192.2 150 68.7
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 3.2e-47 192.2 144 72.2
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 4.2e-47 191.8 154 66.2
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 4.2e-47 191.8 154 68.2
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 5.5e-47 191.4 154 66.2
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 5.5e-47 191.4 154 66.2
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 5.5e-47 191.4 144 72.2
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 9.3e-47 190.7 154 65.6
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 1.2e-46 190.3 151 69.5
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.1e-46 189.5 150 67.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 2.1e-46 189.5 154 66.9
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.1e-46 189.5 151 68.9
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.3e-45 186.8 154 65.6
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.8e-45 186.4 154 64.9
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 3.3e-44 182.2 154 67.5
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 3.3e-44 182.2 135 75.6
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 4.3e-44 181.8 154 69.5
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 7.4e-44 181.0 150 67.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.8e-43 178.3 143 66.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 1.4e-42 176.8 140 65.7
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 3.4e-41 172.2 145 66.9
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 7.6e-41 171.0 225 51.6
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 2.2e-40 169.5 154 64.3
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 2.2e-40 169.5 147 64.6
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 6.5e-40 167.9 151 62.9
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 9.3e-39 164.1 154 59.7
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 3.9e-37 158.7 148 63.5
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 6.7e-37 157.9 152 62.5
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 1.7e-35 153.3 111 76.6
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 2.8e-35 152.5 154 58.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 1.1e-34 150.6 113 75.2
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.4e-34 150.2 114 74.6
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 1.8e-34 149.8 116 75.0
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 2.4e-34 149.4 151 59.6
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 7.7e-33 144.4 148 52.7
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 7.7e-33 144.4 114 71.9
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.0e-32 144.1 144 56.9
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 1.7e-32 143.3 151 56.3
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 6.5e-32 141.4 109 73.4
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 8.5e-32 141.0 164 55.5
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.6e-30 136.7 114 69.3
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.7e-30 135.2 177 51.4
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.3e-29 132.9 106 67.9
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.8e-29 131.0 159 54.1
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.1e-28 130.6 153 47.1
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.4e-28 128.6 104 68.3
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 1.4e-26 123.6 162 51.2
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 5.3e-26 121.7 138 44.9
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.4e-25 119.0 156 51.3
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 7.7e-25 117.9 92 70.7
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.4e-23 113.6 164 48.2
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.9e-23 113.2 156 49.4
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 9.7e-20 100.9 81 69.1
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.2e-19 99.8 126 51.6
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 1.4e-13 80.5 66 66.7
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 1.8e-10 70.1 137 35.8
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.8e-10 70.1 46 80.4
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 1.2e-09 67.4 53 64.2
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 1.0e-08 64.3 42 73.8
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 6.5e-08 61.6 128 37.5
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 1.6e-06 57.0 140 30.7
Oeu011770.1 Olea europaea HOM05D004115 ORTHO05D005004 3.6e-06 55.8 42 66.7


User provided reference genes

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